Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mpop_2149 |
Symbol | rplF |
ID | 6309288 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methylobacterium populi BJ001 |
Kingdom | Bacteria |
Replicon accession | NC_010725 |
Strand | - |
Start bp | 2302700 |
End bp | 2303233 |
Gene Length | 534 bp |
Protein Length | 177 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 642650873 |
Product | 50S ribosomal protein L6 |
Protein accession | YP_001924846 |
Protein GI | 188581401 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0097] Ribosomal protein L6P/L9E |
TIGRFAM ID | [TIGR03654] ribosomal protein L6, bacterial type |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 30 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCTCGCG TAGGCAAGAA GCCCGTCCCC GTCCCGTCCG GCGTCACCGC CACGGTTACG GGTCAGACGG TGAAGATGAA GGGCTCGAAG GGCGAACTCC AGTTCGTCGT CCCGCCCCAG GTCATCGTGG AGTTCAAGGA CGGCGCCGTC TCGGTGCAGC CCAAGGACCA GTCGAAGCAG GCCCGCTCCC TGTGGGGCAC CTCGCGCGCC CAGGTGGCGA ACCTCGTCGA GGGCGTCTCC AAGGGCTTCG AGAAGAAGCT GGAGATCACC GGCGTCGGCT ACCGCGCCGC GATGGCCGGC AAGGCGCTCA AGCTCTCGCT CGGCTACAGC CACGACATCG AGTACGAGAT CCCGGCCGGC ATCACCATCG TGACGCCCAA GCCCACGGAG ATCGTGGTGT CGGGCATCGA CCGGCAGCGC GTCGGTCAGG TCGCGGCGGA GATTCGCGAG TACCGCGGTC CCGAGCCCTA TAAGGGCAAG GGCGTGAAGT ACGCTGGCGA GTTCATCTTC CGCAAGGAAG GCAAGAAGAA GTAA
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Protein sequence | MSRVGKKPVP VPSGVTATVT GQTVKMKGSK GELQFVVPPQ VIVEFKDGAV SVQPKDQSKQ ARSLWGTSRA QVANLVEGVS KGFEKKLEIT GVGYRAAMAG KALKLSLGYS HDIEYEIPAG ITIVTPKPTE IVVSGIDRQR VGQVAAEIRE YRGPEPYKGK GVKYAGEFIF RKEGKKK
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