Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mpop_1996 |
Symbol | |
ID | 6310096 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methylobacterium populi BJ001 |
Kingdom | Bacteria |
Replicon accession | NC_010725 |
Strand | - |
Start bp | 2141597 |
End bp | 2142208 |
Gene Length | 612 bp |
Protein Length | 203 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 642650720 |
Product | NAD(P)H dehydrogenase (quinone) |
Protein accession | YP_001924694 |
Protein GI | 188581249 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG1182] Acyl carrier protein phosphodiesterase |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.122923 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 31 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAAGCTCC TTCACGTCGA CGGCAGCATC CTGGGGCCGC ATTCCGTCAG CCGGACCGTC TCGGCGGCCA TCGTGGACCG CCTGCGGGCG CAGCATCCCG ATCTCGACGT CGCCTACCGC GATCTCGCCC AGACGCCGCT GCCGCATCTC TCCGGCGCGG TCCTCGCCGG GGCGCAGCCC AACGCGACGA ACGCGCCCGA TGTGCAGCAC GACGTCGATC TCGGCCGGCA GGCGCTGGAC GAATTCCTCG CGGCCGATGT CGTGGTGATC GGCGCGCCGC TCTACAATTT CACCCTGTCG AGCCAGCTCA AGGCCTGGAT CGACCGCATC CTCGTGGCGG GCGTCACCTT CCGCTACGGG CCGTCCGGGG CCGAGGGCCT CGCGGGCGGC AAGCGCGTCA TCGCCGTCGT CTCGCGCGGC GGCCTTTACG GGCCGGGCAC GCCCGCCGCT GCGGCCGAGC ACGCGGAAAC GTACTTGCGC ACGGTGCTCG CCTTCATCGG CATCACCGCG CCGGAGATCA TCGTCGCCGA GGGCATCGCC CTTGGCCCAG AGGCCCGCGA GCGGGCTCTG GCCGGCGCAC TCGACGCCGC GGCGGCGCTG AAGGCCGCCT GA
|
Protein sequence | MKLLHVDGSI LGPHSVSRTV SAAIVDRLRA QHPDLDVAYR DLAQTPLPHL SGAVLAGAQP NATNAPDVQH DVDLGRQALD EFLAADVVVI GAPLYNFTLS SQLKAWIDRI LVAGVTFRYG PSGAEGLAGG KRVIAVVSRG GLYGPGTPAA AAEHAETYLR TVLAFIGITA PEIIVAEGIA LGPEARERAL AGALDAAAAL KAA
|
| |