Gene Mpop_1964 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMpop_1964 
Symbol 
ID6312849 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium populi BJ001 
KingdomBacteria 
Replicon accessionNC_010725 
Strand
Start bp2100757 
End bp2101458 
Gene Length702 bp 
Protein Length233 aa 
Translation table11 
GC content73% 
IMG OID642650688 
Producttranscriptional regulator, GntR family 
Protein accessionYP_001924662 
Protein GI188581217 
COG category[K] Transcription 
COG ID[COG1802] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value0.117742 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGACAGG GCGAGAGGAG CCCCCCGACC GATCGTGTCG GAATGATCTG CCGGTCCCTG 
CGCAGGGCCA TCGTGGAGCG GGCTCTGGCC CCGGGTGACC GGCTGCCCGA GGACGCGCTC
GGCGAGCGCT TCAGCGTCAG CCGCACCATT GCGCGGCAGG CGCTCGGCCA GCTGGCGGGC
GAGGGGTTGG TCGAGTTGCG CCGCAATCGC ATCGCCGTGG TCGCGAGCCC GAGCTGGGAG
GAGGCGCGCG ACACCTTCGA CGTGCGCATC AGCCTGGAGC GTCTCGTGGT CCAGCGGCTC
GCCGGCCGCC TCAGCGCCGA GCAGCGGGCC GCGCTCGAGG CGCATATCGC CGGGGAGGAG
CGGGCGAGCG GTGGCCCGGA GGCCGGCTCG ATCCGGCTCG CCACGGAGTT CCACCTGCTG
CTCGCCGAGA TGACCGGAAG TCCGGTGCTG CGCCGCTACG TCGCCGAACT GGGCTACCGC
TGCGCCCTGA TCCTGTCGCT CTACAGCCGG CCGCACTCGT CGGATTGTGC GGTGAGCGAG
CACAGGGAGA TCGTGGCGGC CCTCGTTTCC GGCGATGCCG GGCGCGCGGT CGCCCTGATG
GATCACCACC TCGACGCGGT GGCCGAGCGG GCGCGCATCC TCAACGAGCC CCAGCGCGAG
CACGACCTCA TCCGCCTGCT CGCCCCCTAC GTCGAGGGGT GA
 
Protein sequence
MRQGERSPPT DRVGMICRSL RRAIVERALA PGDRLPEDAL GERFSVSRTI ARQALGQLAG 
EGLVELRRNR IAVVASPSWE EARDTFDVRI SLERLVVQRL AGRLSAEQRA ALEAHIAGEE
RASGGPEAGS IRLATEFHLL LAEMTGSPVL RRYVAELGYR CALILSLYSR PHSSDCAVSE
HREIVAALVS GDAGRAVALM DHHLDAVAER ARILNEPQRE HDLIRLLAPY VEG