Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mpop_1961 |
Symbol | |
ID | 6312846 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methylobacterium populi BJ001 |
Kingdom | Bacteria |
Replicon accession | NC_010725 |
Strand | - |
Start bp | 2095135 |
End bp | 2097252 |
Gene Length | 2118 bp |
Protein Length | 705 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 642650685 |
Product | TonB-dependent siderophore receptor |
Protein accession | YP_001924659 |
Protein GI | 188581214 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG4774] Outer membrane receptor for monomeric catechols |
TIGRFAM ID | [TIGR01783] TonB-dependent siderophore receptor |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 23 |
Fosmid unclonability p-value | 0.353089 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACAAGTC CTGCGCAGGC CCAGCCGGAC CTTCCGGTGA CGACACCGGT GGCGGTCGCC CTGGACGAAC TGGCCGTCGA GGGCCTCGGT CTCGGCCGCG GCGTGCCGCG TCTCGAACCG CAGGGCGGCG TCACGGTCGG CTATCTCGGC AAGGCGACGC GCTCGGCCAC CAAGACGCCG ACGCCCCTGC TCGATACGCC GCAATCCGTC TCGATCGTCA CCCGCGAGCA GATCCTCGAT CAGGGCTTCC AGTCGATCGG CGAGGCGACG CGCTACGTGC CGGGCGTGAT TCAGGCGCAG GGCGAGGGCA ACCGCGACGA GTTGATCATC CGCGGCCAGC GCTCGAACGC CGACTTCTTC GTCAACGGCG TCCGCGACGA CGTGCAGTAC TACCGCGACC TCTACAACAC CCAGCGCATC GAGGTGCTCA AGGGCCCCAA CGCGATGATC TTCGGCCGTG GCGGCGGCGG CGGCGTCATC AACCGGGTGC TCAAGGAGGC CGACGGTGTG CCGGTCCGCG AGATCGTGGC CCAGGGCGGC CAGTTCGCGA ACAAGCGCGT GGCGCTCGAT GTCGGCGACC GCGTCTCCGA CAGCGTCTTC TTCCGCATGA ACGGTGTGTT CGAGGACACC GCGACCTACC GCGACTTCGT CGATATCCGC CGCTACGGCG TGAACCCGAC GATGACCTTC CTGCTCGGGC CGCAGACGAC GCTTCGTCTG TCCTACGAGT ATTTCCACGA CGACCGCACC ACCGATCGCG GCCTGCCCTC GCAGTTCGGT CGGCCTTACC GCTACCGCGA GAACACTTCG ACCTATTTCG GCAACCCGTT CCTGTCGCCG ACCTACGTCA ACGCCCACAT CGCCATGGCG CAGCTCGACC ACGTCTTCGA GAACGGCGTC GTGATGCGCA GCCAGTCGCG CATCGCCGAT TACGAGAAGT TCTATCAGAA CGTCTTCCCG GGCGGCGCGG TGAATGCGGC CGGCACGGCC GTCAACATCT CGGCCTATAA CAGCCAGACG GACCGGACGA ACTACTTCAA CCAGACCGAC TTCACCTACC AGTTCTTGAC AGGTCCGCTC AAGCACACCC TGCTGGGCGG GTTCGAACTG GGCTATCAGG AAGGCCTGAG CCTGCGCCAG GACGGTTTCT TCGCGACCAC CGGCACGCAG ACCCTCGTCG TCAACCCGCT CGCGCCGCTG ACCCGCGTCG GCGTCAACTT CCGCAACATC GCCAGCGGCG CCAACAGCAC CTACGATCTC GGTCTTGCCG CGGCCTACGT CCAGGATCAG ATCGAGCTGA ACGAGTACGT GCAGTTCATC GGCGGCCTGC GCTACGACCA TTTCGACTTC GCGGCGACCG ACCGGCGCAC CAACATCACC AATGCCCGCG TGGACGACCT GATCTCGCCG CGCGCCGGCG TCGTCGTGAA GCCGCTGCCG AACCTCGCCT TCTACACGAG CTACAGCGTC TCCTACCTGC CCTCGTCAGG CGATCAGTTC AGCGCATTGA CGCCGGGTCT CGTCATTGCC CAGCCCGAAA AATTCGAGAA CACGGAAGTG GGCGTGAAGT ACGACGTCTC GCCGGTGCTG CAGGTCACCG GCGCGCTGTT CAACCTCGAC CGCACCAACC AGCGCATCGC CGATCCGAAC CGGCCCGGCT TCTTCCTGAC CTCGGGCCAG ACCAACACGC AGGGCGCGGA GATCGGCGCC AACGGCTACG TCACCGACTG GTGGTCGATC GCGGGCGGCT ACGCCTTCAC CGATGCGCGC ATCACCAACC GCCTCTCGGA CACGATCGTG GCCGGCAACT TCGTCGGCCT CGTGCCGCTC AATTCCTTCA CGCTGTGGAA CAAGTTCGAC ATCGACCCGA GCTTCTCGGT GGGTGTCGGC TTCATCAACC AGTCGCATTC CTTCGCGACC TCGGACAACA CGGTCCGGCT GCCGAGCTAC TCCCGCTTCG ACCTGGGCCT GTTCTACCGG ATCAGCGAGA ATGCACGCGC GCAGGTGAAC ATCGAGAACC TGTTCGACCG CAGCTACATC GTCTCGGCGC ACAACAACAA CAACATCCTG CCCGGCGCTC CCCGCACGGT CCGGGCGCAG ATCATCGTGC GCTGGTAG
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Protein sequence | MTSPAQAQPD LPVTTPVAVA LDELAVEGLG LGRGVPRLEP QGGVTVGYLG KATRSATKTP TPLLDTPQSV SIVTREQILD QGFQSIGEAT RYVPGVIQAQ GEGNRDELII RGQRSNADFF VNGVRDDVQY YRDLYNTQRI EVLKGPNAMI FGRGGGGGVI NRVLKEADGV PVREIVAQGG QFANKRVALD VGDRVSDSVF FRMNGVFEDT ATYRDFVDIR RYGVNPTMTF LLGPQTTLRL SYEYFHDDRT TDRGLPSQFG RPYRYRENTS TYFGNPFLSP TYVNAHIAMA QLDHVFENGV VMRSQSRIAD YEKFYQNVFP GGAVNAAGTA VNISAYNSQT DRTNYFNQTD FTYQFLTGPL KHTLLGGFEL GYQEGLSLRQ DGFFATTGTQ TLVVNPLAPL TRVGVNFRNI ASGANSTYDL GLAAAYVQDQ IELNEYVQFI GGLRYDHFDF AATDRRTNIT NARVDDLISP RAGVVVKPLP NLAFYTSYSV SYLPSSGDQF SALTPGLVIA QPEKFENTEV GVKYDVSPVL QVTGALFNLD RTNQRIADPN RPGFFLTSGQ TNTQGAEIGA NGYVTDWWSI AGGYAFTDAR ITNRLSDTIV AGNFVGLVPL NSFTLWNKFD IDPSFSVGVG FINQSHSFAT SDNTVRLPSY SRFDLGLFYR ISENARAQVN IENLFDRSYI VSAHNNNNIL PGAPRTVRAQ IIVRW
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