| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mpop_1933 |
|---|
| Symbol | |
|---|
| ID | 6309065 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylobacterium populi BJ001 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010725 |
|---|
| Strand | - |
|---|
| Start bp | 2068496 |
|---|
| End bp | 2069392 |
|---|
| Gene Length | 897 bp |
|---|
| Protein Length | 298 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 642650657 |
|---|
| Product | response regulator receiver modulated diguanylate cyclase |
|---|
| Protein accession | YP_001924631 |
|---|
| Protein GI | 188581186 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG3706] Response regulator containing a CheY-like receiver domain and a GGDEF domain |
|---|
| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 0.964426 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 20 |
|---|
| Fosmid unclonability p-value | 0.0629546 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGCATATCG TCATTGTTGA TTCGAGCCGC GTTGTCCTGC GGATCGTGGC CGGCATGCTC
GAACCGCGCG GCCATGTGGT GACGCAGTTC ACAGACTCCG TCGAGGCCCT GGCCTACGTC
ACCGATACGC CGAAGGTTCG TGCCTTGATC ACGAGCCTGG AAGTCCGGCC GCTGAGCGGA
CTGGAGCTGT GCTGGTCAGC CCGGCTGCTG GCCGAGTCGA GCCGCCCCCT CTCGATCATC
GCCATGTCCT CGGCCCGCAA CGCCCGCAAC CTCGCCGAGG CGCTGGACAG CGGCGCCGAC
GACTTCATCG ACAAGCCGCC GGGCGCCGAG GAGCTTCAGG CACGCCTGCG CGCCGCCGAG
CGCCTCACCA CGCTCCAGGG CGACCTGATC CGGCTCGCCG AGACGGATCC GCTTACCGCC
CTGCTCAATC GCCGCGCCTT CCTGCAACGC ACGCGGGATG CCGCCCAGAA GGCCGGCCCG
TTCGGGAATC TGTGTGCGAT CCTTCTCGAC ATCGACCATT TCAAGCGCAT CAACGACGAG
TACGGGCACG ATGTCGGCGA CGCGGCGATC AAGGCGGTGG CCGGGCTGAT CGAGCCGGAG
GGGATCGCCG GACGCCTGGG CGGTGAGGAA TTCGCCGTGA TCGTCGCCGG GCACCCGCTC
GCCGCGGCGG AGGCGATCGC CTCGCGCCTG CGCCTCAAGG CATCCGACCT GCGCATCCGC
TCGCCCAAGG GGCCGGTGCG CCTCACCTGC AGCTTCGGCG TCAGCGAATG GTCGGACGGC
GAGACCGTCG AAGGTCTCCT GAAGCGGGCG GATATCGCCC TCTACGAGGC CAAGGCGACG
GGCCGCAACC GGGTCGTCTC GGCGATGGCC GACCTCATCC TCGCCCGCGC CGGCTGA
|
|---|
| Protein sequence | MHIVIVDSSR VVLRIVAGML EPRGHVVTQF TDSVEALAYV TDTPKVRALI TSLEVRPLSG
LELCWSARLL AESSRPLSII AMSSARNARN LAEALDSGAD DFIDKPPGAE ELQARLRAAE
RLTTLQGDLI RLAETDPLTA LLNRRAFLQR TRDAAQKAGP FGNLCAILLD IDHFKRINDE
YGHDVGDAAI KAVAGLIEPE GIAGRLGGEE FAVIVAGHPL AAAEAIASRL RLKASDLRIR
SPKGPVRLTC SFGVSEWSDG ETVEGLLKRA DIALYEAKAT GRNRVVSAMA DLILARAG
|
|---|
| |