| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mpop_1926 |
|---|
| Symbol | |
|---|
| ID | 6313486 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylobacterium populi BJ001 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010725 |
|---|
| Strand | - |
|---|
| Start bp | 2060261 |
|---|
| End bp | 2061511 |
|---|
| Gene Length | 1251 bp |
|---|
| Protein Length | 416 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | 642650650 |
|---|
| Product | Na+ dependent nucleoside transporter domain protein |
|---|
| Protein accession | YP_001924624 |
|---|
| Protein GI | 188581179 |
|---|
| COG category | [F] Nucleotide transport and metabolism |
|---|
| COG ID | [COG1972] Nucleoside permease |
|---|
| TIGRFAM ID | [TIGR00804] nucleoside transporter |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 22 |
|---|
| Fosmid unclonability p-value | 0.146383 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCTCGACA GGGTGTTCCA CGCCGGCGCG AGCCTCGCCC TGCTGCTCGC GGTGGCGTGG
CTGTTCTCGG TGAACCGGCG GGCGATCCGG CCGCGGGTGG TGTTCGCCGC CCTGGCGCTC
CAAGTCGGAA TCGGCGCGCT GATGCTGTTC GTGCCCGCCG GGCAGCGGGC GCTCGGCGCG
GTGGCGGATG TCGTTACCAC CGTGCTCTCC TTCGGCGATC GCGGCACCGC CTTCCTGTTC
GGCGGCCTCG TCGAGCCGCG GATGTTCGAG CTGTTCGGCG GCTCGGGATT CATCCTGGCC
CTGCGGGTCC TGCCGCAGAT CCTCTACGTC TCGGCGCTGA TCGGCGTGCT CTACCATCTC
GGCCTGATGC AGGCGCTGGC GCGGTTCCTC GGCGCGGCCC TGCGGCGGCT GCTCGGCACC
TCGCCGATCG AATCCTTCTC GGCGGTCGTC ACCATCTTCA TCGGTCAGAG CGAGATCGCC
GTGGCGTTGC GCCCCTTCCT CGCCGCCCTC ACCGGGGCCG AGCTGTTCGC GGTGATGACG
AGCGGTGCGG CCTCCACCGC CGGCTCGATC CTCGCCGGCT ACGCCGCGCT CGGCGTGCCG
ATGCCGTATC TCCTCGCTGC CTCGTTCATG GCGATCCCCG GCGGGCTGCT CTACGCCAAG
ATCCTCGTGC CCTCGACCGA GCCGACGCGC ATCCGGACGA CGCGGGTCGA GTTCGGCGAG
GCGCGGGCGG CCAACCTGAT CGAGGCCGCC GCCGACGGAA CGCAGAAGGG TTTGGGCGTC
GCGGTCGCGG TCGGGGCCAT GCTGATCGCC TTCGTCGGAC TGATCGCGCT GGTGAACGCG
GCGATCGGCT GGACCGGCGG CCTGTTCGGG TTTGCCGGCC TCTCAATCGA GGGCATCCTC
GGCGTCGTGC TGGCGCCGCT CGCCTGGCTG CTCGGCGTAC CCTGGGAACA GGCGACCCTC
GTCGGCGCGG CAATCGGCCA GAAGATCGCC TTCAACGAGT TCCTGGCCTA TGCCAGTCTC
TCGCCGACGC TGAAGGCCGG AACCCTCGAT CCGCGCACCG CCGCGATCCT GTGCTTCGCG
CTCTGCGGCT TCGCCAACCT CGCCTCGGTG GCGATCCAGC TCGCGAGCTT CACCAGCCTC
GCGCCCGAGC GCCGGCCCGA GATCGCCCGG TTCGGCCTGC GGGCGATCCT GGCGGGCACG
CTGTCGAACC TCACCAGCGC GGCCATCGCC GGATTGTTCA TCGCCGGGTG A
|
|---|
| Protein sequence | MLDRVFHAGA SLALLLAVAW LFSVNRRAIR PRVVFAALAL QVGIGALMLF VPAGQRALGA
VADVVTTVLS FGDRGTAFLF GGLVEPRMFE LFGGSGFILA LRVLPQILYV SALIGVLYHL
GLMQALARFL GAALRRLLGT SPIESFSAVV TIFIGQSEIA VALRPFLAAL TGAELFAVMT
SGAASTAGSI LAGYAALGVP MPYLLAASFM AIPGGLLYAK ILVPSTEPTR IRTTRVEFGE
ARAANLIEAA ADGTQKGLGV AVAVGAMLIA FVGLIALVNA AIGWTGGLFG FAGLSIEGIL
GVVLAPLAWL LGVPWEQATL VGAAIGQKIA FNEFLAYASL SPTLKAGTLD PRTAAILCFA
LCGFANLASV AIQLASFTSL APERRPEIAR FGLRAILAGT LSNLTSAAIA GLFIAG
|
|---|
| |