| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mpop_1825 |
|---|
| Symbol | |
|---|
| ID | 6313194 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylobacterium populi BJ001 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010725 |
|---|
| Strand | + |
|---|
| Start bp | 1961981 |
|---|
| End bp | 1963201 |
|---|
| Gene Length | 1221 bp |
|---|
| Protein Length | 406 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 74% |
|---|
| IMG OID | 642650548 |
|---|
| Product | phosphopentomutase |
|---|
| Protein accession | YP_001924523 |
|---|
| Protein GI | 188581078 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG1015] Phosphopentomutase |
|---|
| TIGRFAM ID | [TIGR01696] phosphopentomutase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 4 |
|---|
| Plasmid unclonability p-value | 0.0453691 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 31 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCCCGCG CCCTCCTCAT CGTCCTCGAT TCCGTCGGCA TCGGCGGCGC GCCGGACGCG
GACCGCTACG GCGATGCCGG CTCCGACACG GTCGGCCACA TCGCGGAAGC CTGCGCCGCC
GGGCGCGGTG ACCGGCCGGG CCTGCGCGCC GGCCCCTTGC GCCTGCCGAA CCTCGCGGCG
CTCGGGCTCG GCCTCGCCTG CGAAGGTGCC ACCGGCCGTG TGCCGCCGGG GCTGGCCCCC
GGGGAGCCCC TACGGGCGCT GTGGGGCCAC GCCGTCGAGA CGGCCGCCGG CAAGGATACG
CCGTCGGGCC ACTGGGAGAT CGCCGGTGTG CCGGTGCGCG CGCCCTGGGG CCATTTTCCC
GATACCCATC CCGCCTTCCC GGCGGAACTG ACGGCGGCGC TGATCGCGCG GGCCGGCCTG
CCCGGCATCC TCGGTGATCG CCACGCCTCG GGCACCGCGA TCATCGACGC GTTGGGGGCC
GAGCATGTCC GGACGGGCCG GCCGATCTGC TACACCTCCG CCGACAGCGT GTTCCAGATC
GCCGCCCACG AGGAGGCGTT CGGGCTGGAG CAGCTCTACG AGACCTGCCG CATCGCGCGG
GCGGTCTGCG ACCCCTACCG CGTCGGCCGG GTGATCGCCC GGCCTTTCCT CGGCAGCGAG
GTCGACGGCT TCCGCCGCAC CAGCCGCCGC AAGGATTTTT CCGTCGCCCC GCCCGACGGG
ACCCTGCTCG ACGGGCTCGA GGCCGCCGGT CGTGCCATCG TCAGCGTCGG CAAGATCGGC
GACATCTTCG CCCACCGCGC CACCGGCCGC GAGATCAAGC CCGCGGGCAA TGCCGCCTGT
CTCGACGCGG CGCTCGATGC CTTCGCCGAG CTGCCGGAGG GCGGGTTCGT CTTCCTCAAT
CTCGTGGATT TCGACACGGA GCACGGCCAC CGCCGCGACG TGCCGGGCTA CGCGGCCGAG
CTCGAAGCCT TCGACGCCCG CATCCCCGAG ATCCACGCCG TCCTGAGGCC GGGCGATCTC
TGCGTCATCA CCGCCGACCA CGGCAACGAC CCGACCTGGA CCGGCACCGA ACATACCCGC
GAGCAGGTGC CGGTGCTGGC CTTCGGGCCG GGGCTGGCGA CGGGCGCCAT CGGGCGGCGC
GAAACCTTCG CCGATATCGG CGCCTCGGTC GCCGCGCATC TCGGCCTGCC GCCGCTCGGG
GCCGGCAGGG CATGGTGGTG A
|
|---|
| Protein sequence | MARALLIVLD SVGIGGAPDA DRYGDAGSDT VGHIAEACAA GRGDRPGLRA GPLRLPNLAA
LGLGLACEGA TGRVPPGLAP GEPLRALWGH AVETAAGKDT PSGHWEIAGV PVRAPWGHFP
DTHPAFPAEL TAALIARAGL PGILGDRHAS GTAIIDALGA EHVRTGRPIC YTSADSVFQI
AAHEEAFGLE QLYETCRIAR AVCDPYRVGR VIARPFLGSE VDGFRRTSRR KDFSVAPPDG
TLLDGLEAAG RAIVSVGKIG DIFAHRATGR EIKPAGNAAC LDAALDAFAE LPEGGFVFLN
LVDFDTEHGH RRDVPGYAAE LEAFDARIPE IHAVLRPGDL CVITADHGND PTWTGTEHTR
EQVPVLAFGP GLATGAIGRR ETFADIGASV AAHLGLPPLG AGRAWW
|
|---|
| |