Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mpop_1798 |
Symbol | |
ID | 6313130 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methylobacterium populi BJ001 |
Kingdom | Bacteria |
Replicon accession | NC_010725 |
Strand | + |
Start bp | 1930851 |
End bp | 1931837 |
Gene Length | 987 bp |
Protein Length | 328 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 642650521 |
Product | 40-residue YVTN family beta-propeller repeat protein |
Protein accession | YP_001924496 |
Protein GI | 188581051 |
COG category | [S] Function unknown |
COG ID | [COG3391] Uncharacterized conserved protein |
TIGRFAM ID | [TIGR02276] 40-residue YVTN family beta-propeller repeat |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 0.178604 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGTCGCTC GCTTGAGGGC GGGGCTGGGT TGTGCGGTAG CGGCCGGCGC TTGGTTCGGC ACGCTCGGAA CGGCGCAGGC CTTCACCGCC TACGTCACCA ACGAGAAGGC CAACACCGTC TCGGTGATCG ACACCGCGAC CATGGCGGTG ACCGCGACCT GGAAGGTCGG GCGGCGCCCC CGCGGCGTGA CCCTGTCCAA GGACGACAAG GAACTGTTCG TCTGCGCCAG CGACGACGAC CGCATCGACG TGCTCGACAC GGCGACCGGC AAGGTGGTGC GCTCGCTGCG CTCGGGGCCG GATCCGGAGC AGTTCATCCT CGATCAGAGC GGCAACCCGC TCTACGTCGC CAACGAGGAC GACAGCCAGG TCACTATTCT CGACATCGAG AAGAACAAGG TGCTGGCCGA GGTGCCGGTG GGCGTCGAGC CCGAGGGCAT GGGCCTGTCG CCGGATGGCA AGGTTCTCGT GAACACCTCC GAGACCACCA ACATGGCCCA CTTCATCGAC ACCAAGACCT TCGAGGTGAT CGACAACGTG CTGGTCGATG CCCGGCCGCG CTTCGCCGAG TTCTCGGCGG ACGGCAAGTT CCTCTGGGTC TCGGCGGAGG TCGGCGGCAC CGTCTCGGTG ATTGATGTCG CCACCCGCAA GGTCATCAAG AAGATCACCT TCAAGATCCC GAGCGTCACG GACGAGCAGA TCCAGCCCGT CGGCGTGCGC CTGACCAAGG ACGGTTCCAA GGCCTTCGTG GCGCTCGGGC CGGCCAACCG CGTGGCGGTG GTCGATGCCA AGACCTACGA GGTGCAGAAG TATCTGCCCG TGGGCCAGCG CGTCTGGCAG CTCGCCTTCA CGCCCGACGA GAAGCAGCTC TTCACCACCA ACGGCACTTC CAACGACGTC TCGGTGATCG ACGTCGAGGG GCTGAAGGTG GTCAAGAGCA TCCCGGTCGG GCTGCTGCCC TGGGGCGTGG CGATCTCGAA GAAATAA
|
Protein sequence | MVARLRAGLG CAVAAGAWFG TLGTAQAFTA YVTNEKANTV SVIDTATMAV TATWKVGRRP RGVTLSKDDK ELFVCASDDD RIDVLDTATG KVVRSLRSGP DPEQFILDQS GNPLYVANED DSQVTILDIE KNKVLAEVPV GVEPEGMGLS PDGKVLVNTS ETTNMAHFID TKTFEVIDNV LVDARPRFAE FSADGKFLWV SAEVGGTVSV IDVATRKVIK KITFKIPSVT DEQIQPVGVR LTKDGSKAFV ALGPANRVAV VDAKTYEVQK YLPVGQRVWQ LAFTPDEKQL FTTNGTSNDV SVIDVEGLKV VKSIPVGLLP WGVAISKK
|
| |