| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mpop_1677 |
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| Symbol | |
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| ID | 6309712 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methylobacterium populi BJ001 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010725 |
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| Strand | - |
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| Start bp | 1809823 |
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| End bp | 1811556 |
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| Gene Length | 1734 bp |
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| Protein Length | 577 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 642650400 |
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| Product | pyruvate dehydrogenase |
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| Protein accession | YP_001924375 |
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| Protein GI | 188580930 |
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| COG category | [E] Amino acid transport and metabolism
[H] Coenzyme transport and metabolism |
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| COG ID | [COG0028] Thiamine pyrophosphate-requiring enzymes [acetolactate synthase, pyruvate dehydrogenase (cytochrome), glyoxylate carboligase, phosphonopyruvate decarboxylase] |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.50308 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 32 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCAACCC GCAACGTATC GGATCTCGTG GTCGAGACGC TCCAACAGGC GGGCGTGCGC
CGGGTCTACG GCCTCGTCGG CGACAGCCTG AACGGGATCA CGGAAGCGAT CCGCAGCCGC
GGCGTGATCG ACTGGGTGCA TGTCCGCCAC GAGGAGGTCG CCGCCTTCGC CGCCGCGGGC
GAGGCGCAGG TGACCGGCGA ACTCGCGGTC TGTGCCGGCT CCTGCGGACC GGGCAACCTC
CACCTCATCA ACGGCCTGTT CGACGCCCAC CGCACCCGCA CGCCGGTGCT GGCGATCGCC
GCCCACATCC CGTCGAGCGA GATCGGCCTC AACTACTTCC AGGCGACGCG GCCCGAGGAG
CTGTTCCGCG ATTGCAGCCA TTTCTGCGAG CTGGTCTCGG ACCCGGAGCA GCTGCCCAAC
GTCCTCGAAT CCGCGATCCG CACGGCCGTG GGCAAGCGCG GCGTCGCCGT GGTGGTCATT
CCCGGCACGG TCGCGCTGAA GGAGGCGCCC AAGCGCGCGC TCGCCGCCCC GGCGACCTTG
CGCCCGCGCG CGCCCGTCGC CGTGCCGCCG GCCGACGAAC TCGACCGCCT CGCCGGTCTC
CTCAACAGCT CCAAAAAAAT CACCCTGCTG TGCGGGCGCG GCTGCGCCGG GGCGCATGCG
CCGCTGATGC AACTCGCCGA GCGGCTCAAG AGCCCGATCG TCCACGCGCT CGGCGGCAAG
GAGCATGTCG AGCACGACAA CCCCTACGAT GTCGGCATGA CCGGCCTGAT CGGGTTCTCC
TCGGGCTACG CGGCGATGGA GGCCTGCGAG ACCCTGCTGA TGCTCGGCAC CGATTTTCCC
TACCGCCAGT TCTATCCCGA GCACGCCAAG ATCGCACAGG TCGATCTGCG CCCGGAGAAC
CTGGGCAAGC GCTGCCGGCT CGAACTCGGC CTCGTCGGCG ATGTCGCCGC GACCATCGAG
GCGCTGCTGC CGCGGCTGAC CGGCAACGAT AGCGCGCGCC ATCTCGAAGC CAGCCTCAAG
CATTACGCAA AGGCCCGGGA AGACCTCGAC GACCTCGCCA CCGGTAAGCC GGGGCGCAAG
CCGATCCACC CGCAATACCT CACCCGCCTT CTCAGCGCGG CGGCGCATGA CGACGCGGTG
TTCACGGCCG ATGTCGGCAC GCCCACGGTC TGGGCGGCGC GCTACCTCAC CATGACCGCC
GGTCGGCGCC TGATCGGCTC CTGGGCGCAC GGTTCGATGG CCAACGCCCT GCCCCACGCC
ATCGGCATCC AGGCCGCGAG CCCCGGCCGG CAGGTGATCT CGCTCTCGGG CGACGGGGGC
TTCGCCATGC TGATGGGCGA CATCCTCACC CTCCGCCAGG AGAAGCTGCC GGTGAAGGTG
GTCATCTTCA ACAACGGCAC GCTCGGCTTC GTCGAGCTGG AGATGAAGGC CGCGGGCTAT
CTCGAGACCG GCGTCACGCT CGAGAACCCG GATTTCGCCG CCATGTCCAA CGCCATCGGC
ATCCATGCCC GCCGGGTGGA GGATCCGGGC GATCTCGAAG GCGCGATCCG TGACGTGCTG
GCCCATCCCG GTCCCGCCCT GCTCGACGTG GTGACCAACC GCCAGGAGCT GGCGATGCCA
CCGAAGCTCC AGGCCGAGCA GGTGAAGGGC TTCAGCCTCT ACGCACTCCA GGCGGTGATG
AACGGGCGGG GCGACGCGAT CCTCGATCTG GCCAAGACCA ACCTGCTGCG CTGA
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| Protein sequence | MATRNVSDLV VETLQQAGVR RVYGLVGDSL NGITEAIRSR GVIDWVHVRH EEVAAFAAAG
EAQVTGELAV CAGSCGPGNL HLINGLFDAH RTRTPVLAIA AHIPSSEIGL NYFQATRPEE
LFRDCSHFCE LVSDPEQLPN VLESAIRTAV GKRGVAVVVI PGTVALKEAP KRALAAPATL
RPRAPVAVPP ADELDRLAGL LNSSKKITLL CGRGCAGAHA PLMQLAERLK SPIVHALGGK
EHVEHDNPYD VGMTGLIGFS SGYAAMEACE TLLMLGTDFP YRQFYPEHAK IAQVDLRPEN
LGKRCRLELG LVGDVAATIE ALLPRLTGND SARHLEASLK HYAKAREDLD DLATGKPGRK
PIHPQYLTRL LSAAAHDDAV FTADVGTPTV WAARYLTMTA GRRLIGSWAH GSMANALPHA
IGIQAASPGR QVISLSGDGG FAMLMGDILT LRQEKLPVKV VIFNNGTLGF VELEMKAAGY
LETGVTLENP DFAAMSNAIG IHARRVEDPG DLEGAIRDVL AHPGPALLDV VTNRQELAMP
PKLQAEQVKG FSLYALQAVM NGRGDAILDL AKTNLLR
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