| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mpop_1610 |
|---|
| Symbol | |
|---|
| ID | 6312437 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylobacterium populi BJ001 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010725 |
|---|
| Strand | + |
|---|
| Start bp | 1737944 |
|---|
| End bp | 1739077 |
|---|
| Gene Length | 1134 bp |
|---|
| Protein Length | 377 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 642650334 |
|---|
| Product | glycosyl transferase group 1 |
|---|
| Protein accession | YP_001924309 |
|---|
| Protein GI | 188580864 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0438] Glycosyltransferase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 5 |
|---|
| Plasmid unclonability p-value | 0.0810231 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 17 |
|---|
| Fosmid unclonability p-value | 0.0108296 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGCGCATTG CCCAGGTTGC CCCGCTCGCG GAAGCCGTGC CGCCGAAGTT CTATGGCGGC
ACCGAGCGTG TCGTTTCGTG GATCACGGAA GAACTCGTCC GTCAGGGTCA CGACGTGACC
CTGTTCGCGA GCGGTGATTC CCAGACTTCG GCAAAGCTCG CCGCCTGCCA TCCGGAGGGC
CTGCGCCTTC TCGGCTACCG CGACCACACC GCGGGCCACC TCGCCATGCT GCACCACGTG
CATCGCCGGG CGCACGAGTT CGATGTGATC CACTTCCACA TCGATCTTCT GCAGTATCCG
ATGTTCGAGG ATCTGTATCA CAAGTGCCTG ACGACCATGC ATGGTCGCCT GGACGTGCCG
GACTTCATGC CGGTCTACAA CACCTTCACG GGCATGCCCC TGGTCTCGAT CTCGGACAAC
CAGCGCGAGC CGATGCCCGA GAACTCCAAC TGGCTGGCCA CGATCCATCA CGGTCTGCCG
AAGGAGAACT GCCCGTACTA CCCGGAGGCC AAGGGCGGCT ATCTCGCCTT CCTCGGCCGC
ATCTCGCCCG AGAAGCGCCC CGACCGCGCG ATCGAGATGG CGATCCGCTC CGGCATCCCG
CTGAAGATCG CCGCCAAGGT CGACAAGGCC GACCAGGAAT ACTGGGACGA GACGATCGAG
CCGATGATCC ATCATCCGCT GGTCGAGTAT ATCGGCGAGA TCAACGAGGA GCAGAAGAAG
GACTTCCTCG GCAACGCCCT GGCGCTCGCC TTCCCGATCG ATTGGCCGGA GCCCTTCGGC
CTCGTGATGA TCGAGGCGAT GTCGGCCGGT ACGCCGGTGA TCGCCTTCGG CAACGGCTCG
GTGCCGGAAG TCATCAAGGA CGGCGTCTCG GGCTTCATCG TCAAGACGAT GGACGAGGCG
GTCGAGGCCT GCCGCCGGGC CAAGGATCTG CCGCGCGCCG GCGTCCGCGC CCATTTCGAG
AGCCGTTTCA CGGCCGAGGT CATGGTCCGC AAGTACGTCT CGGCCTACGA GCAGCTCCTG
GCCGGCCAGG GAAACGTGAT CAAGATGCCC GCCGCCGGCG CCTTCTCGCC GCAGTACGGT
GAGCTGAACG GCTCCGCCCA CGGCCCGATC CACGTCGCCG CGATGCCGGC CTGA
|
|---|
| Protein sequence | MRIAQVAPLA EAVPPKFYGG TERVVSWITE ELVRQGHDVT LFASGDSQTS AKLAACHPEG
LRLLGYRDHT AGHLAMLHHV HRRAHEFDVI HFHIDLLQYP MFEDLYHKCL TTMHGRLDVP
DFMPVYNTFT GMPLVSISDN QREPMPENSN WLATIHHGLP KENCPYYPEA KGGYLAFLGR
ISPEKRPDRA IEMAIRSGIP LKIAAKVDKA DQEYWDETIE PMIHHPLVEY IGEINEEQKK
DFLGNALALA FPIDWPEPFG LVMIEAMSAG TPVIAFGNGS VPEVIKDGVS GFIVKTMDEA
VEACRRAKDL PRAGVRAHFE SRFTAEVMVR KYVSAYEQLL AGQGNVIKMP AAGAFSPQYG
ELNGSAHGPI HVAAMPA
|
|---|
| |