| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mpop_1589 |
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| Symbol | |
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| ID | 6312600 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methylobacterium populi BJ001 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010725 |
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| Strand | + |
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| Start bp | 1716751 |
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| End bp | 1718490 |
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| Gene Length | 1740 bp |
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| Protein Length | 579 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 642650313 |
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| Product | Shikimate kinase, 3-dehydroquinate synthase |
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| Protein accession | YP_001924288 |
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| Protein GI | 188580843 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0337] 3-dehydroquinate synthetase
[COG0703] Shikimate kinase |
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| TIGRFAM ID | [TIGR01357] 3-dehydroquinate synthase |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.025257 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 29 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCGTCC CCCTGCCGCC GGCGGCGCCG CCCGGCGAAC CGATCGAAGC ACGCCTGCGC
CGCGGCCTTG GAGCCCGGTC GATCGTGCTC GTCGGTCTGA TGGGAGCGGG CAAGAGCACC
GTCGGGCGCC GCCTCGCCAG CCGCCTCGGG CTGATGTTCA AGGATGCCGA CCACGAGATC
GAGGCGGCGG CCAAGCTCAC CATCGCCGAC ATCTTCGCCA TCTACGGCGA GGCGAGCTTT
CGCGAGGGCG AGGAGCGCGT GATCGCGCGG TTGCTGCGCG AGGGCCCGAT GGTGCTGGCC
ACCGGCGGCG GAGCCTTCAT GCGCGAGGCC ACGCGGGCGC GGATCGCCGA TGGCGGCATC
TCGGTCTGGC TCAAGGCCGA CCTCGATGTG CTGATGCGCC GCGTCCGCAA GCGCAACACC
CGGCCCCTGC TCCAGACCGA GGATCCGGAG GCGACCATGC GCGCGCTGAT GGAGGTGCGT
CATCCGGTCT ATGCCCAGGC CGACGTCACG GTGCTCTCCC GCGAGGTGTC ACACGATCGT
GTGGTGGAGG ACGTGATGGA AGCTCTCGAC CTTCACATCA ACCCGTCCCG CGCGACCCAG
ATACAACATT TGACATCGTT CATGAAGCAG CAACCCTCGC GTGTAAACGT TCCCCTCTCG
GGCGGACGCG AATACGATAT CCGGATCGGC CGCGGCCTCA TCGACGCGGT GGGCGCGGAG
GCACGGGATC TCGGCGCCCG GGCCGCCGGC ATCGTCACCG ACGAGACCGT CGCCGGTCTC
TACGGCGAGC GCGTCCGGGC GAGCCTGGAG GCCGCCGGTC TGCGCTGCGG GATCATCGCC
GTGCCGCCGG GCGAAGCCTC GAAGAGTTAT TCGCAGTTTG CCCGCGTCTG CGACGGGCTT
TTGAGCCAGA AGATCGAGCG CGGTGACCTC GTCGTGGCGC TGGGCGGCGG CGTGGTCGGC
GATCTGGCCG GCTTTTCGGC CGCCTCCCTG CGCCGCGGCG TCCGCTTCGT TCAGGTTCCG
ACAACCCTAC TCGCACAGGT TGATTCTTCG GTCGGCGGCA AGACCGGAAT CAATTCGCCC
CACGGCAAGA ACCTGATCGG CGCCTTCCAC CAGCCGCGCC TGGTGCTGGC CGACACCGCG
ACCCTCGACA CGCTCTCGGA GCGCGAGATG CGGGCGGGCT ATGCCGAGGT CGCCAAGTAC
GGCCTGATCG GCGATGCCGA CTTCTTCGAA TGGTGCGAGG CGAACTGGGC CGGCATCTTC
TCCGGCGGGC CGGAGCGCGA CGAAGCGGTG GCCGCCTGCT GCCGCGCCAA GGCCGGGGTC
GTCACCCGCG ACGAGCGGGA GGACGGCGAG CGCGCCCTGC TCAATCTCGG CCACACCTTC
GGCCACGCCC TGGAGCGGCT GACCGGCTAC GACGCCGCCC GCCTCGTCCA CGGCGAGGGC
GTCGCGATCG GGCTGGCGCT GGCCTTCCGC TTCTCGGCCC GGCTGGGCCT GTGCTCCGGC
CAGGATGCGG GGCGCGTGGC CAACCACCTC GCGCTCGCGG GCCTGCCGAC CCGCCTGCAG
CAGGTGCCGG GCGGGGCCGG CGACCCGGAC GCGCTCCTCG ACGCCATGGC CCAGGACAAG
AAGGTCCGCG ACGGGCAGCT CACCTTCATC CTCGCTCACG GCATCGGCCA GAGCTTCATC
GCGCCGGGGA TCGCGGCGGC CGAGGTGCGG GCGTTCCTGG AGGAGGAATT GCGGAGCTGA
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| Protein sequence | MTVPLPPAAP PGEPIEARLR RGLGARSIVL VGLMGAGKST VGRRLASRLG LMFKDADHEI
EAAAKLTIAD IFAIYGEASF REGEERVIAR LLREGPMVLA TGGGAFMREA TRARIADGGI
SVWLKADLDV LMRRVRKRNT RPLLQTEDPE ATMRALMEVR HPVYAQADVT VLSREVSHDR
VVEDVMEALD LHINPSRATQ IQHLTSFMKQ QPSRVNVPLS GGREYDIRIG RGLIDAVGAE
ARDLGARAAG IVTDETVAGL YGERVRASLE AAGLRCGIIA VPPGEASKSY SQFARVCDGL
LSQKIERGDL VVALGGGVVG DLAGFSAASL RRGVRFVQVP TTLLAQVDSS VGGKTGINSP
HGKNLIGAFH QPRLVLADTA TLDTLSEREM RAGYAEVAKY GLIGDADFFE WCEANWAGIF
SGGPERDEAV AACCRAKAGV VTRDEREDGE RALLNLGHTF GHALERLTGY DAARLVHGEG
VAIGLALAFR FSARLGLCSG QDAGRVANHL ALAGLPTRLQ QVPGGAGDPD ALLDAMAQDK
KVRDGQLTFI LAHGIGQSFI APGIAAAEVR AFLEEELRS
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