Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mpop_1580 |
Symbol | |
ID | 6312743 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methylobacterium populi BJ001 |
Kingdom | Bacteria |
Replicon accession | NC_010725 |
Strand | + |
Start bp | 1703573 |
End bp | 1704202 |
Gene Length | 630 bp |
Protein Length | 209 aa |
Translation table | 11 |
GC content | 75% |
IMG OID | 642650304 |
Product | Sarcosine oxidase gamma subunit |
Protein accession | YP_001924279 |
Protein GI | 188580834 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG4583] Sarcosine oxidase gamma subunit |
TIGRFAM ID | [TIGR01375] sarcosine oxidase, gamma subunit family, heterotetrameric form |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 30 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGTCTGAGC CGGCAACGAC CCAAGCGTCC GCCTCTCTCT GGCAGCCTCG CAGCGCCTGG GGCGGTGCAC CGCGTGCCGG GCGGCACGGT GCGCCGGGGC AGGCCGGCAT CCGCCTGACC CTGCTCGAAG GGCGCGGCCT CGCCACGCTC GTCGCGACCG AGGGAAACGA AGCCGGCCTA CAGACCGTGT TGGCCGAGCG TTTCGGGCTG TCCGCACCGG AGGCGGGCGG AGCCGCCTTC GAGGGCGAGC GCGGTCTGGT CTGGTCCGCG CCCGGCCAGT GGCTCGCGGT GGCGCCCTCG CCCGACGCCC TCCGGGATCT GCCCGAGGCC CTGCGCGGTC TCGCCGCCGT CACCGACCAG AGCGACAGCC GCGCCCTGGT GCGGGTCTCG GGACCGCAGG CCCGTGCCCT GCTTGCCAAG GGCGTGGCGG TCGATCTGCA TCCCCGCGCC TTCGGGCCGG GCCGGGCGGC GGTGACGAGC ATCGCCCATA TCGGCGTGCA GCTCTGGCAG CGCGATGCGG GCCCGAGCTA CGACATCGCG GTCGCCCGCA GCTTCGCCGG CAGTTTCTGG GCATGGCTGG AGCATGCCGC GGCCGAGTTC GGCTACGAGG TCGCCACCGT CCAGGGCTGA
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Protein sequence | MSEPATTQAS ASLWQPRSAW GGAPRAGRHG APGQAGIRLT LLEGRGLATL VATEGNEAGL QTVLAERFGL SAPEAGGAAF EGERGLVWSA PGQWLAVAPS PDALRDLPEA LRGLAAVTDQ SDSRALVRVS GPQARALLAK GVAVDLHPRA FGPGRAAVTS IAHIGVQLWQ RDAGPSYDIA VARSFAGSFW AWLEHAAAEF GYEVATVQG
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