Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mpop_1579 |
Symbol | |
ID | 6312875 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methylobacterium populi BJ001 |
Kingdom | Bacteria |
Replicon accession | NC_010725 |
Strand | + |
Start bp | 1700551 |
End bp | 1703580 |
Gene Length | 3030 bp |
Protein Length | 1009 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 642650303 |
Product | sarcosine oxidase, alpha subunit family |
Protein accession | YP_001924278 |
Protein GI | 188580833 |
COG category | [E] Amino acid transport and metabolism [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0404] Glycine cleavage system T protein (aminomethyltransferase) [COG0492] Thioredoxin reductase |
TIGRFAM ID | [TIGR01372] sarcosine oxidase, alpha subunit family, heterotetrameric form |
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Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 31 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCACGC TCGCCCTTCA GCGCGCGGAG GCACCCGTCT CCGCGACCTC GGCCGACCAG CCCTTCCGCA CTGCCGCCGG CGGCCTGATC GACCGGAACC GGCCGCGCGA CTTCACCTTC GACGGGCGCC GCCTCACCGG CTGCCACGGC GACACGCTGG CCTCGGCGCT GCTCGCCAAC GGCGTGCGCC TCGTCGGCCG CTCGTTCAAG TATCACCGGC CCCGCGGCAT CCTCTCGGCC GGCTCGGAGG AGCCGAACGC GCTGGTCGAA CTCCGCTCCG GCGCCCGGCG CGAGCCCAAC ACCCGCGCCA CCATGGCCGA GCTCTACGAG GGGCTGGAGG CGACGAGCCA GAACCGCTGG CCGACGCTCG CGGTCGATGC GCTCTCGGTC AACGCGCTGC TCTCGCCGGT CTTCGCGGCG GGCTTCTACT ACAAGACCTT CATGTGGCCG GCGGCCTTCT GGGAGAAGCT CTACGAGCCG ATGATCCGGC GCGCCGCGGG CCTCGGCCGC GCCGCCGACG CGCCCGACCC GGACACCTAC GACCACGCCT ACGCCCATTG CGACGTGCTC GTCATCGGCG GCGGCCCGGC CGGCCTGTCG GCGGCGCTCG CTGCCGGCCG CTCCGGCGCG CGGGTGATTT TGGTCGACGA GGATTTCGCC ACCGGCGGCC GCCTCCTGGC CGAGCGGCGC GAGATCGGCG GCGCGAGCGG GGCCGACTGG GCCGCCCGCG CGGTGGCCGA GCTGCAGAGC CTGCCGGAAG TCCGTATCCT CTCCCGCACC ACCCTGTTCG GCGTCTACGA TCACGGCGCC TACGGCGCGG TCGAGCGCGT CTCCGACCAT CTCGCCGTGC CGGCGGCGCA CGCCCCGCGC CAGCGGCTGT GGCGGATCCT GGCCAAGCGC GCGGTGCTCG CGGCCGGCGC CATCGAGCGC CCGCACGTCT TCGGCGGCAA CGACCGGCCC GGCGTGATGC TGGCCGGCGC CGTGCGGACC TATCTCAACC GCTACGGCGT GCTGCCGGGC CGCCGCTTGG CCGTGTTCAC GTCGAGCGAC GACGGCTGGC GCACCGCCGC CGACGTGCTC GCCGCAGGCG GCGGGCTTGC GGCGGTGATC GACACTCGGC CCTCCGTCCC CCCCGCTCTG CGCCGCATGG CGGAAGCCGC CGGGGCGCGG GTGGTGACGG GCGGATACGT CGCCGGCACC AAGGGCCATC TGGGTCTGAG CGCGATCCAG GTCGTGGACG GCTATCACAG CGTGGAGACG ATCGCCTGTG ATGGCCTCGC CATGGCCAAT GGCTGGAACC CGGTGGTGCA TCTCGACTCG CACCTGTCGC GCCGGCCGGT CTGGGACGAG GCGATCCACG CCTTCGTACC GGGCACCCTC CCCTCCGGCA TGCAGGCGGC CGGCGCCGCC GCCGGGCGCT TCACCCTCGC CGAGTGCCTG GAGAGCGGCG CGCAAGCCGG CGCCGCGGCC GCGACGGATT GCGGCTTCAG CGCCACGGCC GAGGCCGCTC CGAAAACCGA TCCGGAGAGT GTGGCGCACA CGCCGCTCTG GCGGGTGCCG AAGCCTCGCG GAAAGGCCTT CGTCGATTTC CAGAACGACG TGGCTGCCTC CGACGTCGAA CTCGCCCACC GCGAGGGCTT CCGCGCCGTT GAATTGCTGA AGCGCTACAC CACGCTCGGC ATGGCGACGG ACCAGGGCAA GACCTCGAAC CTCGCCGGCC TCTCGATCAT GGCCGAGCTG ACCGGCAAGG ACATCCCGAG CGTCGGCACC ACGGTGTTCC GTCCGCCCTT CACGCCCGTC GCCATCGGCG CCTTCGCCGG CCATCACCGC GGCAAGGATT TCCGCGCCAC CCGCCACGTC CCCTCCCATG CCTGGGCCGA GGAGAACGGG TGCGTCTTCG TCGAGGCCGG CCTGTGGCTG CGTCCCGCCT ACTTCCCAAG GGCCGGCGAG ACCGATTGGC TCGACACCGT GGTGCGCGAG GTCGAGACCG TGCGCGCCCG CGTCGGGGTC TGCGACGTCA CCACGCTCGG CAAGATCGAC ATCCAGGGCC GCGACGCACT GGCCTTCATC GAGCGGGTCT GCGCCAACCC CTTCGCGACG CTCCCCGTCG GCAAGGCCCG CTACGCCGTC CTCCTGCGTG AGGACGGCCT CATCCTCGAC GACGGCACCA TCGCGCGGAT GGGCGAGACG CACTACGTCA TGACCGCCTC GACGGCCAAC GCCGCCAAGG TGATGCAGCA CCTCGAATTT TGCCGGCAAT GGTTGTGGCC GGAGCTCGAC GTGCAACTCG CCTCGGTGAG CGAGCAATGG GCGCAATACG CGGTCGCCGG CCCCCGCGCC CGCGATACGC TCCGCCGGAT CGTCGATCCC GGCTTCGATA TTTCGAACGA CGCCTTCCCG TTCCTCGCCT GTGCCGACGT CACCGTCGGC GGCGGCATCC CGGCGCGCCT GTTCCGCATC TCGTTCTCGG GCGAACTCGC CTATGAACTC GCGGTGCCGG CGGCCTACGG CGACGCCGCG TGGCGGGCGA TCATGCAGGC GGGCCTGCCC TACGGCATCA CCGCCTACGG CTCGGAGGCG CTCTCGGTGA TGCGCATCGA GAAGGGTCAT GCGGCGGGCG CCGAGATCAA CGGCCAGACC ACCGCCCGCG ACCTCGGCCT CGGCGGGATG CTTGCCAAGA AGAAGGACTA TATCGGCCGC CTGATGAAGG AGCGCCCGGC CTTCACCGAT CCGGACCGTC CGGTTCTGGC CGGCTTCCGT CCGGTCGATC CGAGCGCGCG GCTCCGGGCA GGCGCGCATT TTCTCGCGCG CGATGCGGCG CCGAGTTTGG AGGCGGACGA GGGCGTGATG ACCTCGGTGG CCTACTCGCC GAGCCTGAGG ACGTGGATCG GCATCGGCCT GATCCGGCGC GGACCGGAGC GCCACGGCGA GCGGGTGCGC GCCTACGATC CGGTGCGCGG CGCCGACATC GAGGTCGAGA TCTGTTCGCC GGTCTTCGTC GACCCGAAAG AGGAGAAGCT GCGTGTCTGA
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Protein sequence | MTTLALQRAE APVSATSADQ PFRTAAGGLI DRNRPRDFTF DGRRLTGCHG DTLASALLAN GVRLVGRSFK YHRPRGILSA GSEEPNALVE LRSGARREPN TRATMAELYE GLEATSQNRW PTLAVDALSV NALLSPVFAA GFYYKTFMWP AAFWEKLYEP MIRRAAGLGR AADAPDPDTY DHAYAHCDVL VIGGGPAGLS AALAAGRSGA RVILVDEDFA TGGRLLAERR EIGGASGADW AARAVAELQS LPEVRILSRT TLFGVYDHGA YGAVERVSDH LAVPAAHAPR QRLWRILAKR AVLAAGAIER PHVFGGNDRP GVMLAGAVRT YLNRYGVLPG RRLAVFTSSD DGWRTAADVL AAGGGLAAVI DTRPSVPPAL RRMAEAAGAR VVTGGYVAGT KGHLGLSAIQ VVDGYHSVET IACDGLAMAN GWNPVVHLDS HLSRRPVWDE AIHAFVPGTL PSGMQAAGAA AGRFTLAECL ESGAQAGAAA ATDCGFSATA EAAPKTDPES VAHTPLWRVP KPRGKAFVDF QNDVAASDVE LAHREGFRAV ELLKRYTTLG MATDQGKTSN LAGLSIMAEL TGKDIPSVGT TVFRPPFTPV AIGAFAGHHR GKDFRATRHV PSHAWAEENG CVFVEAGLWL RPAYFPRAGE TDWLDTVVRE VETVRARVGV CDVTTLGKID IQGRDALAFI ERVCANPFAT LPVGKARYAV LLREDGLILD DGTIARMGET HYVMTASTAN AAKVMQHLEF CRQWLWPELD VQLASVSEQW AQYAVAGPRA RDTLRRIVDP GFDISNDAFP FLACADVTVG GGIPARLFRI SFSGELAYEL AVPAAYGDAA WRAIMQAGLP YGITAYGSEA LSVMRIEKGH AAGAEINGQT TARDLGLGGM LAKKKDYIGR LMKERPAFTD PDRPVLAGFR PVDPSARLRA GAHFLARDAA PSLEADEGVM TSVAYSPSLR TWIGIGLIRR GPERHGERVR AYDPVRGADI EVEICSPVFV DPKEEKLRV
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