Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mpop_1547 |
Symbol | |
ID | 6312851 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methylobacterium populi BJ001 |
Kingdom | Bacteria |
Replicon accession | NC_010725 |
Strand | - |
Start bp | 1661817 |
End bp | 1662803 |
Gene Length | 987 bp |
Protein Length | 328 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 642650272 |
Product | diguanylate phosphodiesterase |
Protein accession | YP_001924248 |
Protein GI | 188580803 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG2200] FOG: EAL domain |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.637723 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 0.00351778 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
| |
Sequence |
Gene sequence | ATGAGAGGCG AGCCCGCTGT TCTGCCGCAC CGCCCGCCTC TCGCCGAAGC GGAGCAGGGC GCCGCCCCGA TCAAGCCCGC TGCCTTGATC CGCTTGTCCG CGCCGACCCT CGGCTCGGGG CCCCCCGCTG CCGCGGTGCC CCCCGGCGCA CAGCCCCTCC AGCCCCGATT CGCGGATCTG GGGCTCGCCG ATCTTCGGGC GGCCCTGGAC GGAGACGAGT TCTCGCTCGC CTACCAGCCC ATCGTGTCGG CGGCGACGAG AGCGATCACC GGCTGTGAAG CGTTGCTGCG CTGGGACCAT CCGATCCTGG GACCGGTGTC GCCCGCCGAT TTCGTGCCGC TCGCCGAGGA GACGGGCGCG ATCGGCCCGA TCGGGCGCTG GGTTCTCGAA ACCGCCTGCC GTCAGGCGGC GGCGTGGCCG GAGCATTGCC GGGTCTCGGT CAACGTCTCG CCGGTCCAAT TGCAGGCGCC GGGCTTCGCG GCCCAGGTTG CCGCAGCCCT GCAGGCCAGC GGGTTGGCGG CCCGCCGGCT CGAACTGGAG CTGACCGAGG GGGTTCCGAT GCGCGACGCC GCCGTCGCGC TCAACGGCAT CGTGGCGGTC CGGGCGCTGG GCGTCAGCGT TGCCCTCGAT GATTTCGGAA CCGGCTTCGC GTCGCTCGGC TACCTGCAGC GCTTCGTCTT CGACCGGATC AAGATCGACC GCTCGTTCAT CCGGGACCTG GGTGCGGCGC GGGAGAGCTG GTTCCTGGTC CGGACGATGC ACGACATCGC GCATCACTTC GGCATGGCGG TGACCGCCGA AGGGATCGAG ACCGAGGACG AGGCCCAGCT GCTGCGCGAG TTCGGTTCCA GGGAGTTGCA GGGCTTCCTG TTCAGCCGTC CCGTCACGAG CGCGGCGCTG ACCGAACTCC TCGCCGGGAC GGCGCAGGCG CCGAGAGGGA GAGAGGCGGA GCGACAACCG AAGTCCCTGA GCCATGCAGC CCCCTGA
|
Protein sequence | MRGEPAVLPH RPPLAEAEQG AAPIKPAALI RLSAPTLGSG PPAAAVPPGA QPLQPRFADL GLADLRAALD GDEFSLAYQP IVSAATRAIT GCEALLRWDH PILGPVSPAD FVPLAEETGA IGPIGRWVLE TACRQAAAWP EHCRVSVNVS PVQLQAPGFA AQVAAALQAS GLAARRLELE LTEGVPMRDA AVALNGIVAV RALGVSVALD DFGTGFASLG YLQRFVFDRI KIDRSFIRDL GAARESWFLV RTMHDIAHHF GMAVTAEGIE TEDEAQLLRE FGSRELQGFL FSRPVTSAAL TELLAGTAQA PRGREAERQP KSLSHAAP
|
| |