Gene Mpop_1518 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMpop_1518 
Symbol 
ID6313327 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium populi BJ001 
KingdomBacteria 
Replicon accessionNC_010725 
Strand
Start bp1638337 
End bp1639035 
Gene Length699 bp 
Protein Length232 aa 
Translation table11 
GC content74% 
IMG OID642650243 
Productorotidine 5'-phosphate decarboxylase 
Protein accessionYP_001924219 
Protein GI188580774 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG0284] Orotidine-5'-phosphate decarboxylase 
TIGRFAM ID[TIGR01740] orotidine 5'-phosphate decarboxylase, subfamily 1 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value0.438965 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCGGAGA GTGCCGACCC CCGCGACCGC CTGATCGTCG CCCTCGACCT GCCCGACGTC 
GCGGCGGCGG AGCGGCTCGT CGCGCGCATC GGCGACGCGG CGACCTTCTA CAAGATCGGC
TATCGGCTCG CCTATGCGGG CGGGCTCGAC TTCGCCGCCC GGCTGGCCCG CGAGGGCAAG
AAGACCTTCC TCGATCTCAA GCTCCACGAC ATCGGCAACA CCGTCGAGGA GGGCGTGCGC
TCGGCCTCCG CCCTGGGCGC GACCTTCCTG ACGGTGCATG CCTATCCGCA GACCATGCGC
GCGGCCGTGC GCGGCCGGGG TCCGGGCCTG AAGATCCTCG CGGTCACCGT GCTGACCTCC
TACGACGATG CGGATGCGGC GGAAGCCGGC TATGCCCTGC CGGTGGCCGA CCTCGTCGCG
CAGCGCGCGA GCCAGGCGGC CGCGATCGGC ATCGACGGGA TCGTCTGCGC GGCGGCCGAG
GCAGGCGCGG TGCGCGGAAG AATCGGGCCG TCGGGGCTGA TCGTGACGCC CGGCATCCGG
CCCGCGGGCG CGGAGGCCGG GGACCAGAAG CGGGTGATGA CGCCGGGGCA GGCGCGGGCG
GCGGGCATCG ACCACGTGGT GGTCGGGCGC CCGATCACCG GGGCCGGGGA TCCCCGCGCG
GTCGCCCGGA CTATCGTTGC CGAGATGGAG AACGTGTGA
 
Protein sequence
MPESADPRDR LIVALDLPDV AAAERLVARI GDAATFYKIG YRLAYAGGLD FAARLAREGK 
KTFLDLKLHD IGNTVEEGVR SASALGATFL TVHAYPQTMR AAVRGRGPGL KILAVTVLTS
YDDADAAEAG YALPVADLVA QRASQAAAIG IDGIVCAAAE AGAVRGRIGP SGLIVTPGIR
PAGAEAGDQK RVMTPGQARA AGIDHVVVGR PITGAGDPRA VARTIVAEME NV