| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mpop_1465 |
|---|
| Symbol | |
|---|
| ID | 6309571 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylobacterium populi BJ001 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010725 |
|---|
| Strand | - |
|---|
| Start bp | 1580533 |
|---|
| End bp | 1581987 |
|---|
| Gene Length | 1455 bp |
|---|
| Protein Length | 484 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 642650191 |
|---|
| Product | F0F1 ATP synthase subunit beta |
|---|
| Protein accession | YP_001924167 |
|---|
| Protein GI | 188580722 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG0055] F0F1-type ATP synthase, beta subunit |
|---|
| TIGRFAM ID | [TIGR01039] ATP synthase, F1 beta subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 21 |
|---|
| Fosmid unclonability p-value | 0.186879 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCGAACA CCGCTTCCCC CACCACGGCG TCCAACGCCA AGGGCCGCAT CACCCAGGTC
ATCGGCCCGG TCGTGGACGT GCAGTTCGAC GGCTACCTGC CGGAGATCCT GAACGCGCTG
GAGACCAAGA ACCAGGGCAA CCGCCTCGTG CTCGAGGTGG CCCAGCAGCT CGGCGAGAAC
ACCGTCCGCT GCATCGCCAT GGACACCTCG GAAGGCCTCG TGCGCGGCCA GGAGGTCTCC
GACACCGGCG CGCCGATCCG GGTGCCGGTC GGCCACAACA CCCTCGGCCG CATCATGAAC
GTCATCGGCG AGCCGATCGA CGAGGCCGGC CCGATCGAGG CCGACACCTA CCGCGCCATC
CACCAGCCGG CCCCGTCCTA CGACGAGCAG TCGACCGAGG CGCAGATCCT CGTCACCGGC
ATCAAGGTCG TCGACCTCCT CGCTCCCTAC GCCAAGGGCG GCAAGATCGG CCTGTTCGGC
GGCGCCGGCG TCGGCAAGAC CGTGCTGATC ATGGAGCTGA TCAACAACAT CGCCAAGGCG
CACTCGGGCT ACTCGGTGTT CGCCGGGGTC GGCGAGCGGA CGCGTGAGGG CAACGATCTC
TACCACGAGA TGATCGAGTC CAACGTCAAC AAGAACCCCA AGGAGAACAA CGGCTCGGCC
GAGGGCTCCA AGTGCGCGCT GGTCTACGGC CAGATGAACG AGTCGCCCGG CGCCCGCTCC
CGCGTGGCGC TGACCGGCCT GACCATCGCC GAGCAGTTCC GCGACGAGGG CCAGGACGTG
CTCTTCTTCG TCGACAACAT CTTCCGCTTC ACGCAGGCGG GCTCCGAGGT GTCGGCGCTT
CTGGGCCGCA TCCCCTCCGC GGTGGGCTAC CAGCCGACGC TGGCCACCGA CATGGGCGCG
CTGCAGGAGC GCATCACCAC CACGACGAAG GGCTCGATCA CCTCGGTGCA GGCGATCTAC
GTGCCGGCCG ACGACCTGAC CGACCCGGCG CCCGCCGCCT CGTTCGCCCA CCTCGACGCC
ACGACCGTGC TCTCGCGCTC GATCGCCGAG AAGGGCATCT ACCCGGCGGT CGACCCGCTC
GACTCCACCT CGCGCATGCT CTCCCCGGCG ATCCTCGGTG AGGAGCACTA CGACGTGGCC
CGCCGCGTCC AGCAGACCCT GCAGCGCTAC AAGTCGCTCC AGGACATCAT CGCGATCCTG
GGCATGGACG AGCTGTCGGA AGAGGACAAG CTGACGGTGG CCCGCGCCCG CAAGATCGAG
CGCTTCCTCA GCCAGCCGTT CCACGTCGCC GAGGTGTTCA CCGGCTCGCC GGGCAAGCTC
GTCGCGCTGG AAGACACGAT CAAGGGCTTC AAGGGCCTGG TCGAGGGCAA GTACGACGAT
CTGCCGGAGG CCGCCTTCTA CATGGTCGGC TCCATCGAGG AGGCCCAGGA GAAGGCCAAG
AAGCTCGCCG CCTAA
|
|---|
| Protein sequence | MANTASPTTA SNAKGRITQV IGPVVDVQFD GYLPEILNAL ETKNQGNRLV LEVAQQLGEN
TVRCIAMDTS EGLVRGQEVS DTGAPIRVPV GHNTLGRIMN VIGEPIDEAG PIEADTYRAI
HQPAPSYDEQ STEAQILVTG IKVVDLLAPY AKGGKIGLFG GAGVGKTVLI MELINNIAKA
HSGYSVFAGV GERTREGNDL YHEMIESNVN KNPKENNGSA EGSKCALVYG QMNESPGARS
RVALTGLTIA EQFRDEGQDV LFFVDNIFRF TQAGSEVSAL LGRIPSAVGY QPTLATDMGA
LQERITTTTK GSITSVQAIY VPADDLTDPA PAASFAHLDA TTVLSRSIAE KGIYPAVDPL
DSTSRMLSPA ILGEEHYDVA RRVQQTLQRY KSLQDIIAIL GMDELSEEDK LTVARARKIE
RFLSQPFHVA EVFTGSPGKL VALEDTIKGF KGLVEGKYDD LPEAAFYMVG SIEEAQEKAK
KLAA
|
|---|
| |