Gene Mpop_1429 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMpop_1429 
Symbol 
ID6313667 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium populi BJ001 
KingdomBacteria 
Replicon accessionNC_010725 
Strand
Start bp1544016 
End bp1545176 
Gene Length1161 bp 
Protein Length386 aa 
Translation table11 
GC content73% 
IMG OID642650155 
Productphage portal protein, HK97 family 
Protein accessionYP_001924131 
Protein GI188580686 
COG category[S] Function unknown 
COG ID[COG4695] Phage-related protein 
TIGRFAM ID[TIGR01537] phage portal protein, HK97 family 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.659761 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value0.284789 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTGGAT TCATCGCGCG GCTCGCGCGG GCCGCGGGCT ACGTGCCTGC GACGAAGGCC 
GCAGCAGCGG TGGCGCTCTA CGGCGAGGCG CGCGCGGTGT GGACTGCGCG CGACTACGGG
GCACTCGCCC GCGAGGGGTT TCAGCGCAAT GCCATCGTCC ACCGCGCCGT CCGGCTGGTC
GCCGAGGCCG CGGCCTCGCT GCCGCTGACG CTGGCCGGCG CCGACGAGGC GCATCCGCTG
ATCGACCTGC TCGCCCGCCC GAACCCTCGC GAGGGCGGGA TGCGCTTCCT CGACGGCATC
TACGGCCACC TCCTGGTCTC CGGCAACGCC TATATCGAGG CGGTCGAAAT CGATGGGAGC
CCCCGCGAGC TGTTCTCGCT GCGCCCCGAT CGGATGCGGG TGATCGCCGG ATCCGATGGC
TGGCCGGTGG CCTACGACTA CGCCGTCGGC GGCCGTCGCA TCCGCTACGA GCAGGTGGGT
GCGGTGCCGC CGATCCTGCA CCTAACGCTG TTCAACCCGC TCGACGACCA TTACGGCCTC
TCGCCGATGG AGGCGGCGGC CGTGCCGCTC GACATCCACA ACGCCGCCGG CGCCTGGAAC
AAGGCACTGC TCGACAACGC CGCACGCCCG TCCGGCGCCC TGGTCTTCGC GCCGAGCACA
GGCGCGGCCT TGAGCGACAC GCAGTTCACC CGCCTCAAGG CGGAGCTGGA GGCGAGCTAT
CAGGGCAGCG CCAATGCCGG CCGCCCGCTT CTCCTCGACG GCGGCCTCGA CTGGCGCCCG
CTCTCGCTGT CGCCGAAGGA GATGGACTTC GTCGAGGCCA AGGCCGCCGC CGCCCGCGAG
ATCGCCCTGG CCTTCGGCGT GCCGCCGCTG CTGCTCGGGC TTCCGGGCGA CAACACCCAC
GCGAACTACG CCGAGGCCAA CCGCGCCTTC TACCGCCAGA CGGTCATCCC GCTGGTGCGC
CGCACCGCCG ACTCCCTCGC CCGCTGGCTG GAGCCGGCCT TCGGCCCCGC GCGGCTTGAG
CCGGATCTCG ACGCCGTCGA AGCGCTGGCG ACCGAGCGCG AGTCGCTGTG GCGCCGGGTG
CAGGGGGCGG ATTTCCTGTC TGCGGACGAG AAGCGCGTGG CTGTGGGGTA TCCCGCGCAA
GTCCCGGGGT CCGGGGCCTG A
 
Protein sequence
MAGFIARLAR AAGYVPATKA AAAVALYGEA RAVWTARDYG ALAREGFQRN AIVHRAVRLV 
AEAAASLPLT LAGADEAHPL IDLLARPNPR EGGMRFLDGI YGHLLVSGNA YIEAVEIDGS
PRELFSLRPD RMRVIAGSDG WPVAYDYAVG GRRIRYEQVG AVPPILHLTL FNPLDDHYGL
SPMEAAAVPL DIHNAAGAWN KALLDNAARP SGALVFAPST GAALSDTQFT RLKAELEASY
QGSANAGRPL LLDGGLDWRP LSLSPKEMDF VEAKAAAARE IALAFGVPPL LLGLPGDNTH
ANYAEANRAF YRQTVIPLVR RTADSLARWL EPAFGPARLE PDLDAVEALA TERESLWRRV
QGADFLSADE KRVAVGYPAQ VPGSGA