| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mpop_1428 |
|---|
| Symbol | |
|---|
| ID | 6313819 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylobacterium populi BJ001 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010725 |
|---|
| Strand | - |
|---|
| Start bp | 1543484 |
|---|
| End bp | 1543957 |
|---|
| Gene Length | 474 bp |
|---|
| Protein Length | 157 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 76% |
|---|
| IMG OID | 642650154 |
|---|
| Product | phage prohead protease, HK97 family |
|---|
| Protein accession | YP_001924130 |
|---|
| Protein GI | 188580685 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG3740] Phage head maturation protease |
|---|
| TIGRFAM ID | [TIGR01543] phage prohead protease, HK97 family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.84162 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 23 |
|---|
| Fosmid unclonability p-value | 0.230633 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGATGGCC ATTTCACCGG CTACGCCAGC CTGTTCGGCG TGCCCGATCT CGGCCGCGAC
ACCGTCGCGC CGGGTGCCTT CGCGGCGAGC CTCGCCCGGC GGGGCGCGGG GGGCGTGCGG
ATGCTGTGGC AGCACGATCC GGCCGAGCCG ATCGGCTCCT GGCTCTCCCT CAAGGAGGAT
GGCCGCGGCC TGCGGGTCGC GGGCCGGCTC AATCTCGCGG TCCAGCGCGC CCGCGAGATC
GACGCGCTGA TGCGCGAGGG CGCCCTCGAT GGGCTCTCCA TCGGCTTTCG CGTCGTGCGC
GCCGTACCCG AGCGCGGCGG GCGCCGGCTC CTCGCCGTCG ATCTGTGGGA GGTCTCGCTG
GTGACCTTCC CGCTCCAGCC CGACGCGCGG GTGATCCGTG CCGCGGCGCC GCGCCCCTTC
GTTCCGCCGC GCCTGCGCCT GCGCCTCGCC GCTGCGCTCG CGGCGCGGGC CTGA
|
|---|
| Protein sequence | MDGHFTGYAS LFGVPDLGRD TVAPGAFAAS LARRGAGGVR MLWQHDPAEP IGSWLSLKED
GRGLRVAGRL NLAVQRAREI DALMREGALD GLSIGFRVVR AVPERGGRRL LAVDLWEVSL
VTFPLQPDAR VIRAAAPRPF VPPRLRLRLA AALAARA
|
|---|
| |