Gene Mpop_1402 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMpop_1402 
Symbol 
ID6309909 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium populi BJ001 
KingdomBacteria 
Replicon accessionNC_010725 
Strand
Start bp1522551 
End bp1523060 
Gene Length510 bp 
Protein Length169 aa 
Translation table11 
GC content72% 
IMG OID642650128 
ProductCcmE/CycJ protein 
Protein accessionYP_001924104 
Protein GI188580659 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG2332] Cytochrome c-type biogenesis protein CcmE 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.0579765 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACCCGCA AGAGCCGCCG CCTGATCCTC ATCGCCGCCT GCGGCGCCGT GCTGGCGCTG 
GCGCTCGGAT TGATCCTGTC GGCGATGAGC GGCTCGATCG TGTTCTTCCG CTCCCCCGCG
GAGGTGGCGT CCCAAGGCGT CCCGCCGGGC ACCCGATTCC GCCTCGGCGG CCTCGTGAAG
GACGGTTCGG TGAAGCGCGG GCCGGACCAG AACGTCGAGT TTTCCGTGAC CGACACCAAC
GCCACGGTTC CGGTGCAGTA TCGCGGCCTG CTGCCCGACC TGTTCCGCGA GGGCCAGGGC
ATCGTCGCCG AGGGCACGCT CGATGCCGGC GGCGTGTTCC GGGCCGACAC GGTGCTGGCC
AAGCACGACG AGAACTACAT GCCCCGCGAG GTCGCCGACG CCCTCAAGGC GCAGGGGCGC
TGGCAGGAAG GCGGGGGCAA AGAGGCTCCG AAGGACGCGG CGAAGCCGGC CTCGGCCGAC
GCCACCCTGG GCCAGCGCAG CGAGCGGTGA
 
Protein sequence
MTRKSRRLIL IAACGAVLAL ALGLILSAMS GSIVFFRSPA EVASQGVPPG TRFRLGGLVK 
DGSVKRGPDQ NVEFSVTDTN ATVPVQYRGL LPDLFREGQG IVAEGTLDAG GVFRADTVLA
KHDENYMPRE VADALKAQGR WQEGGGKEAP KDAAKPASAD ATLGQRSER