Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mpop_1384 |
Symbol | |
ID | 6314066 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methylobacterium populi BJ001 |
Kingdom | Bacteria |
Replicon accession | NC_010725 |
Strand | + |
Start bp | 1499480 |
End bp | 1500832 |
Gene Length | 1353 bp |
Protein Length | 450 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 642650110 |
Product | TRAP dicarboxylate transporter, DctM subunit |
Protein accession | YP_001924086 |
Protein GI | 188580641 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG1593] TRAP-type C4-dicarboxylate transport system, large permease component |
TIGRFAM ID | [TIGR00786] TRAP transporter, DctM subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 3 |
Plasmid unclonability p-value | 0.0258921 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 31 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCACCG CCGCGATCGG CTTCCTCTAT GCCGGGGCGA CGCTGGGGGC GATGCTCTCA GGGATTCCCA TCGCCTTCGC GCTCGGCTTC GTGGCGCTGG CCTTCATGTA CGCGTTCATG CCCGCGGCCT CGCTCGATAC GGTGGCGCAG AACGTCTACG AGGAGATGGC CTCGATCACC CTGCTCTCGA TCCCGCTCTT CATCCTGAAG GGTGCGGCGA TCGGCCGGAG CCGGGCCGGT CAGGATCTCT ACTCGGCGAT GCATGCCTGG ATGCACCGCA TCCCCGGGGG GCTCGGCATC GCCAACGTGT TCGCCTGCGC CCTGTTCGCG GCGATGGCCG GCTCCTCCCC CGCCACCTGC TCGGCGATCG GCTCGGCCGG CATCCCGGAG ATGCGCAAGC GCGGCTACTC GCCGGGCTTC GCCGCCGGGA TCATCGCCGC GGGCGGCACG CTCGGCATCC TGCTGCCGCC CTCGATCACC ATGATCCTCT ACGCGGTCGC CGCCGAGCAA TCGCTGGGGC GCCTGTTCCT CGCCGGGATC GGGCCGGGCT TCCTGCTGGT CGCCCTGTTC GCCGGCTGGT CGGTGTTCCG CTTCCGCTCC GAGTTCGCGG CGGCGAAGCT CGCCTACGAG CGGACGGGTA CGGAGCACCC GATCCTGCGG GAGGACAGCT ACAGCATGCG CGAGCGCTTC TCGACGCTGC CGCGGGTGCT GCCCTTCGTG GTGCTGCTCA CCGGCGTCAT GGTCGCGCTC TACGGCGGCT ACGCCACGCC GTCCGAGACG GCCGGCCTCG GCGGCCTGCT GGCGCTCGCC CTGATCGCGG TGATCTACGG CGTCTGGCGC TTCCGCGATC TCGACCCGAT CCTCACGGCC ACGCTGCGGG AATCGACCAT GCTGATGCTG ATCATCGGCA TGTCGCTCCT CTACGCCTAC GTGATGAGCT ACCTCCACAT CTCACAGGCG GCGGCCCAGG CCATCGTCGC GATGCAGCTC TCGCCCTGGG TCCTGCTCGC CACGATCCTG GCCCTGGTGA TCGCGCTCGG CTTCTTCCTG CCGCCGGTCT CGATCATCCT GATGACGGCG CCGATCATCC TGCCGCCGCT CAAGGCCGCC GGGTTCGACC TCGTCTGGTT CGGCGTGGTG ATGACGATCA CCATGGAGAT GGGCCTGATC CACCCGCCGG TGGGCCTCAA CATCTTCGTC ATCAAGAACA TCGCCCCCGA CATCCCGCTC AAGGACATCA TCTGGGGCAC CCTGCCCTTC GTGATCCTGA TGGGTGTCGC GATCGTCCTG CTCTGTCTCG TGCCGGGCAT CGCCCTGTGG CTGCCGGACC TGCTGCTGCC GACGACGCGG TGA
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Protein sequence | MSTAAIGFLY AGATLGAMLS GIPIAFALGF VALAFMYAFM PAASLDTVAQ NVYEEMASIT LLSIPLFILK GAAIGRSRAG QDLYSAMHAW MHRIPGGLGI ANVFACALFA AMAGSSPATC SAIGSAGIPE MRKRGYSPGF AAGIIAAGGT LGILLPPSIT MILYAVAAEQ SLGRLFLAGI GPGFLLVALF AGWSVFRFRS EFAAAKLAYE RTGTEHPILR EDSYSMRERF STLPRVLPFV VLLTGVMVAL YGGYATPSET AGLGGLLALA LIAVIYGVWR FRDLDPILTA TLRESTMLML IIGMSLLYAY VMSYLHISQA AAQAIVAMQL SPWVLLATIL ALVIALGFFL PPVSIILMTA PIILPPLKAA GFDLVWFGVV MTITMEMGLI HPPVGLNIFV IKNIAPDIPL KDIIWGTLPF VILMGVAIVL LCLVPGIALW LPDLLLPTTR
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