| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mpop_1314 |
|---|
| Symbol | |
|---|
| ID | 6310130 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylobacterium populi BJ001 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010725 |
|---|
| Strand | + |
|---|
| Start bp | 1421899 |
|---|
| End bp | 1423164 |
|---|
| Gene Length | 1266 bp |
|---|
| Protein Length | 421 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 73% |
|---|
| IMG OID | 642650031 |
|---|
| Product | Cellulase |
|---|
| Protein accession | YP_001924020 |
|---|
| Protein GI | 188580575 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG3405] Endoglucanase Y |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 8 |
|---|
| Plasmid unclonability p-value | 0.67253 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 30 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCGGCCCC CCCGCACGCC GTGCCGTTCC CGCCTCGGCG GCACCCTGCG CCGCGCCGGA
TGGGCGCTCG CCCTTGCGGC GGCCAGCCCC GCCGCCGCCC AGCCGACGCC GCAGCCGGCC
GCGCCGCAGC CCGCATCTCC GCAGCAGACC TCGCCGCAGA TGGCGCAGCC GGCTCCCCAG
CAGACGGAGA CCAGCACCGT GCCGCCCGCC ACGGCCCTGC CCGGCCTGCC GCGCTCCGAG
ACGCCGGCCC GGACCGATTC CGGCCCTTCC CTCGCCAATA CCCTGGACGA CGACGCGGCC
TGGCGCGCCT ACCGGGCACG GTTCATCACC GAGCAGGGCC GGATCGTCGA CACCGCCAAC
GGCATGATCA GCCACAGCGA GGGCCAGGGC TACGGCATGC TGATCGCGGT CGCGGCCGGC
GACCGGGCCG CCTTCGAGCG GATCTGGGGC TGGACCCGTG CCAACCTGAT GGTGCGCTCC
GACGAATTGC TGGCGTGGCG CTGGGCGCCC GACCACCGCC CGGCGGTGGC GGACATGAAC
AACGCCACCG ACGGCGACAT CCTCGTCGCC TGGGCGCTCA CCGAGGCGGC GGAGGCCTGG
GGCGAGCCGT CCTACCGCAC CGCCGCGCGC CGCATCGCCG TCGAGTTCGG TCGCAAGACC
ATCCTGTTCA AGGACCCCCA CGGACCGCTC CTGCTGCCCG CCGTCTCCGG CTTCTCGGCC
CGCGAACGCG CCGACGGGCC GCTCATCAAC CTGTCCTACT GGGTCTTCCC CGCCTTCCAG
CGGCTGCCGA TCGTCGCCCC GGAATACGAC TGGGCCTCGC TGATCCGCAG CGGCCTCGAC
TTCCTGCGCC AGTCCCGGTT CGGGCCGAGC AGCCTGCCGA CCGAGTGGAT CTCGGCCAAG
GACAGCCTGC GCCCCGCCGA CGGCTTCCCG CCGCTGTTCT CCTACAACGC GATCCGCGTG
CCGCTCTACC TCGCCTGGGC CGGGGTCGGA CGGCCGGAGG ATTACACGCC GTTCAAGACG
CTGTGGGGCG GGATCGAGCG CGAGCGCCTG CCGATCGTCG ACACCCGCGA CGGGCAGCCG
GTCGAGTGGC TGAGCGAGGT CGGCTACACG GCGATCCCCG CGCTCACCGC CTGCGCCGCC
GACGGCACGC CGTTTCCCGA ATCGTTAAGA ACGGTGCAGG AGAATCAGAA CTACTATCCG
ATGACCCTCC ACCTCCTCGC GCTGATCGCG GCCCGGATGC GGTATCCGTC ATGCGTGAAG
TCCTGA
|
|---|
| Protein sequence | MRPPRTPCRS RLGGTLRRAG WALALAAASP AAAQPTPQPA APQPASPQQT SPQMAQPAPQ
QTETSTVPPA TALPGLPRSE TPARTDSGPS LANTLDDDAA WRAYRARFIT EQGRIVDTAN
GMISHSEGQG YGMLIAVAAG DRAAFERIWG WTRANLMVRS DELLAWRWAP DHRPAVADMN
NATDGDILVA WALTEAAEAW GEPSYRTAAR RIAVEFGRKT ILFKDPHGPL LLPAVSGFSA
RERADGPLIN LSYWVFPAFQ RLPIVAPEYD WASLIRSGLD FLRQSRFGPS SLPTEWISAK
DSLRPADGFP PLFSYNAIRV PLYLAWAGVG RPEDYTPFKT LWGGIERERL PIVDTRDGQP
VEWLSEVGYT AIPALTACAA DGTPFPESLR TVQENQNYYP MTLHLLALIA ARMRYPSCVK
S
|
|---|
| |