Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mpop_1260 |
Symbol | |
ID | 6313285 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methylobacterium populi BJ001 |
Kingdom | Bacteria |
Replicon accession | NC_010725 |
Strand | - |
Start bp | 1352396 |
End bp | 1353328 |
Gene Length | 933 bp |
Protein Length | 310 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 642649977 |
Product | hypothetical protein |
Protein accession | YP_001923966 |
Protein GI | 188580521 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG3664] Beta-xylosidase |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 0.00533292 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
| |
Sequence |
Gene sequence | ATGCTTGAAG CGGTGATGCT CTGGAACGAG CCCAACAACA AGTCGCACTG GGATCCCGAG ATCGACCCGG ACTGGTTCCT GTTCGGCGAG ATGGTGAAGG ACGCCTCCCG CGCGATCCGG GCGGAGGCGC CGGGCCTGCC GCAGGTGCTC GGCGGCATCT CGCCGATCGA CCCCGGTTTC ATGCGGCGGA TGCAGGCCCA AGGGGTGCTC GACGGCCTCG ACGCGGTGGC GGTGCACGGC TTCCCGCTCG ACTGGAACCT CTGGCAGATC CACGAATGGC CCCAGAAGAT CGCCGAGATC CGCGCGGTCA CGCATCTGCC GGTCTGGGTC TCGGAGGTCG GCGTTTCGAG CTTCGGCGCC GAGGAGGTCC AGGCCTGGGG CTGCCGCCGC ACCGCGGAGC TGCTGAAGGG CCAAGCGCCC CGCATCCACT GGTACAGCCT CTACGACCTG CCGCTCGAAT GGGGCGCCAC CACCCGCCAC AAGGAGGCGG AGGGCTCCTC CTATTACCGC CACTTCCACA TGGGGCTCCT GCGCCAGGAT GGCACGCCCA AGCTGGCGCT CGAAGACTTC GCCCGCTGCA CGCCGGACTT CGGCCTGTGC CAGTGGTTCC ACTTCGAGGA TCCCCGCCTC GACGAGGCAG TCGCCTGGAT GAAGCGCCTC GGCGTCACCC ATCTGCGCAC CGGCCTCTCC TGGGCCGATA GCTTCCGCCC CAACGCCCTC GACTGGTTCG ATCGGCAGAT GGAGGCGCTG GCCGACTTCC AGGTGACGGC GACCTTCTGC TTCACGCCCG AGCACCGCGG CATCGCTGCG CATCACACCT CCGCGCCGCT GGTGCGCGCG GAGTTCTCGG AGTTCTGCGC CGCGATGGTG CGCCGCTACG CCGAACCTGC ACGGGTCCGC GCCGAGGCGA TGCCGGAGAT GCCGCTGCCT TAG
|
Protein sequence | MLEAVMLWNE PNNKSHWDPE IDPDWFLFGE MVKDASRAIR AEAPGLPQVL GGISPIDPGF MRRMQAQGVL DGLDAVAVHG FPLDWNLWQI HEWPQKIAEI RAVTHLPVWV SEVGVSSFGA EEVQAWGCRR TAELLKGQAP RIHWYSLYDL PLEWGATTRH KEAEGSSYYR HFHMGLLRQD GTPKLALEDF ARCTPDFGLC QWFHFEDPRL DEAVAWMKRL GVTHLRTGLS WADSFRPNAL DWFDRQMEAL ADFQVTATFC FTPEHRGIAA HHTSAPLVRA EFSEFCAAMV RRYAEPARVR AEAMPEMPLP
|
| |