Gene Mpop_1260 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMpop_1260 
Symbol 
ID6313285 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium populi BJ001 
KingdomBacteria 
Replicon accessionNC_010725 
Strand
Start bp1352396 
End bp1353328 
Gene Length933 bp 
Protein Length310 aa 
Translation table11 
GC content69% 
IMG OID642649977 
Producthypothetical protein 
Protein accessionYP_001923966 
Protein GI188580521 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG3664] Beta-xylosidase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.00533292 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGCTTGAAG CGGTGATGCT CTGGAACGAG CCCAACAACA AGTCGCACTG GGATCCCGAG 
ATCGACCCGG ACTGGTTCCT GTTCGGCGAG ATGGTGAAGG ACGCCTCCCG CGCGATCCGG
GCGGAGGCGC CGGGCCTGCC GCAGGTGCTC GGCGGCATCT CGCCGATCGA CCCCGGTTTC
ATGCGGCGGA TGCAGGCCCA AGGGGTGCTC GACGGCCTCG ACGCGGTGGC GGTGCACGGC
TTCCCGCTCG ACTGGAACCT CTGGCAGATC CACGAATGGC CCCAGAAGAT CGCCGAGATC
CGCGCGGTCA CGCATCTGCC GGTCTGGGTC TCGGAGGTCG GCGTTTCGAG CTTCGGCGCC
GAGGAGGTCC AGGCCTGGGG CTGCCGCCGC ACCGCGGAGC TGCTGAAGGG CCAAGCGCCC
CGCATCCACT GGTACAGCCT CTACGACCTG CCGCTCGAAT GGGGCGCCAC CACCCGCCAC
AAGGAGGCGG AGGGCTCCTC CTATTACCGC CACTTCCACA TGGGGCTCCT GCGCCAGGAT
GGCACGCCCA AGCTGGCGCT CGAAGACTTC GCCCGCTGCA CGCCGGACTT CGGCCTGTGC
CAGTGGTTCC ACTTCGAGGA TCCCCGCCTC GACGAGGCAG TCGCCTGGAT GAAGCGCCTC
GGCGTCACCC ATCTGCGCAC CGGCCTCTCC TGGGCCGATA GCTTCCGCCC CAACGCCCTC
GACTGGTTCG ATCGGCAGAT GGAGGCGCTG GCCGACTTCC AGGTGACGGC GACCTTCTGC
TTCACGCCCG AGCACCGCGG CATCGCTGCG CATCACACCT CCGCGCCGCT GGTGCGCGCG
GAGTTCTCGG AGTTCTGCGC CGCGATGGTG CGCCGCTACG CCGAACCTGC ACGGGTCCGC
GCCGAGGCGA TGCCGGAGAT GCCGCTGCCT TAG
 
Protein sequence
MLEAVMLWNE PNNKSHWDPE IDPDWFLFGE MVKDASRAIR AEAPGLPQVL GGISPIDPGF 
MRRMQAQGVL DGLDAVAVHG FPLDWNLWQI HEWPQKIAEI RAVTHLPVWV SEVGVSSFGA
EEVQAWGCRR TAELLKGQAP RIHWYSLYDL PLEWGATTRH KEAEGSSYYR HFHMGLLRQD
GTPKLALEDF ARCTPDFGLC QWFHFEDPRL DEAVAWMKRL GVTHLRTGLS WADSFRPNAL
DWFDRQMEAL ADFQVTATFC FTPEHRGIAA HHTSAPLVRA EFSEFCAAMV RRYAEPARVR
AEAMPEMPLP