Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mpop_1256 |
Symbol | |
ID | 6313281 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methylobacterium populi BJ001 |
Kingdom | Bacteria |
Replicon accession | NC_010725 |
Strand | - |
Start bp | 1346440 |
End bp | 1347348 |
Gene Length | 909 bp |
Protein Length | 302 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 642649973 |
Product | transcriptional regulator, LysR family |
Protein accession | YP_001923962 |
Protein GI | 188580517 |
COG category | [K] Transcription |
COG ID | [COG0583] Transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.360363 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 0.00967719 |
Fosmid Hitchhiker | No |
Fosmid clonability | decreased coverage |
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Sequence |
Gene sequence | ATGGAACTCC GGCATCTTCG CTACTTCTCG GCCGTCGCGG AGGAGTTGAA TTTCACGCGC GCCGCCGCGC GCCTCGGGAT CGGCCAGCCA CCGCTGAGCC AGCAGATCCA GCAACTCGAA CGGGAGATCG GAACGCCGCT GTTCTACCGT CCCCCTCGGG GGGTCTCGTT GACCGAGGCG GGCAAGCGGT TCCTGCGGGA CGCCCAGGAG ATCCTGTCGC TGTCGGACCG GGCGCTCGAG AATGCGCGGC GCGCCTCGCG GGGTGAAACC GGCACCTTAC GGGTGGGCTT CACCTCCTCC GCGGCGTTCC ATCCCTTCGT GTCCGCGATC ATCCGCGACT TCGGAATCGC TTATCCAGAT GTCGGCATCA ACCTGATCGA AGACACCACC ACTCAGTTGC TGCAGGCTCT GAACAGCAGC CGGCTGGATG CGGCCTTCAT GCGTCCGGCC AGCGGCGAGG CGCGATCGCT CGAGTGCCAC CTCCTGTTCA AGGAGCCGAT GCTGGTCGCG TTGCCGTCCG GGCATCGCTG CGCGGCCCAG TCCAGGATCC CTCTCGCGGC GCTCTGCGAT GAGACGTTCG TGCTCTACCC CCGCCGAAAC GGCCGTGCGC TGCATGACGC CATCATTCAG GCCTGCGAGC AGGCAGGTTT CCAGCCGCGC ATCGCGCAAG AGGGGCCGCA GATGGCCACC ACGATCAACC TCGTCGCGGC CGGCGTCGGC GTCTCCATCG TGCCCGCCTC CATGAGCCAG ATCCAGGCAC GGGGCGTCCA TTTCCGGGAG ATCGCCGGCC CAGGCCCCAG GGCGGCACTC AGCCTCGTCA GCCTGCAATC CGACGCGGCC AGCCCCCTGC GCAACTTCGT CGACCTCGTG CTCCGGCACG TCAGGGATGG GCAGATGGGC CGCGACTGA
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Protein sequence | MELRHLRYFS AVAEELNFTR AAARLGIGQP PLSQQIQQLE REIGTPLFYR PPRGVSLTEA GKRFLRDAQE ILSLSDRALE NARRASRGET GTLRVGFTSS AAFHPFVSAI IRDFGIAYPD VGINLIEDTT TQLLQALNSS RLDAAFMRPA SGEARSLECH LLFKEPMLVA LPSGHRCAAQ SRIPLAALCD ETFVLYPRRN GRALHDAIIQ ACEQAGFQPR IAQEGPQMAT TINLVAAGVG VSIVPASMSQ IQARGVHFRE IAGPGPRAAL SLVSLQSDAA SPLRNFVDLV LRHVRDGQMG RD
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