Gene Mpop_1216 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMpop_1216 
Symbol 
ID6309008 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium populi BJ001 
KingdomBacteria 
Replicon accessionNC_010725 
Strand
Start bp1302480 
End bp1304168 
Gene Length1689 bp 
Protein Length562 aa 
Translation table11 
GC content71% 
IMG OID642649934 
Productmethyl-accepting chemotaxis sensory transducer 
Protein accessionYP_001923923 
Protein GI188580478 
COG category[N] Cell motility
[T] Signal transduction mechanisms 
COG ID[COG0840] Methyl-accepting chemotaxis protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.743011 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value0.567814 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGGGCCC TAACCAATCT TCCCGTCGTC GCCAAACTTG TCTTGGTTTT TGCTCTCGTC 
ATCGCCGCCG TCTCGGGCTC CTCCTTCACG AGCTGGCGCA GCCTCGGCAC GATCGAGGAG
TCGAATCGCT GGCGCGATCA CAGCTACGAG GTTCTGCTTC AGCTCGATCG GCTCACCGGT
GCCCTGGTGG ATCAGGAGAC CGGTCTACGC GGCTATCTGA TCTCGGCCGA TCCCTCTTTC
CTCGAGCCGT ACAATTCGGG CGCCAAGACC TATGGCGAGA CGCTGAGGCG GCTGCGCGGC
CTCGTGTCCG ACAACCCGCA GCAGGTGAGC CGGCTCGACG CACTCGATGC GGCGACCCGT
CAATGGATCG GAGACGTCGC CGAGCGCGAG ATCGCCCTGA TGCGCAACGA GGCGACCCAG
GCGCAGGCGC GTCAGATCGA GGCCTCCGGT GCGGGCAAGA GCGCCATGGA CGCGGTGCGC
AAGGCCGCCG CCGAGATCGC GAGTTCCGAG ACCAGCTTGC TGGAAGTCCG TGCCGCCACC
GTGAAGGACG CGGCCGCGTC GTCCCGCTTC GCCGTCGGTG CCGGCTTCGT TGCGCTCCTC
GTCGTGGCCG GGCTCGGGAT CCTGGTGCTG AACGGCTTCG TCTCCCGCCC GGTCCGCCGG
ATGACCGCGC TGATGGGCCG CCTCGCGGAA GGAGACGCGA GCGTCGAGAT CCCCTTCCGC
GAGCGCCGCG AGGAGGTCGG GGCCATGGCG AACGCGGTGC AGGTGTTCAA GGACAACCTG
ATCCGCACCC GCGCCCTGGA AGAGGAGACG GCGCTGGCGC GGGCCGGTGC CGAGGCGCAG
CGCAAGGCGG CGATGCGCGA GATGGCCGAC AACTTCGAGC GGGCGGTGAG CGGTATCGTC
GGTGCGGTGT CCTCCGCCGC CACGGAGCTG CAGGCGACCG CCGAGAGCAT GGCCGGCACC
GCTGCGCAGA CGGCCGGCCA GTCCTCCGCC GCCGCCGCGG CCGCCGAAGA GGCCGCCACC
AATGTCGGCA CGGTCGCCGC GGCCGCCGAG GAGCTCGGCG CCTCGGTGCA GGAGATCGCC
CGGCAGGTCA CCGGCTCGAC GAGTCTGGCG CAGAAGGCCG TGGTCGAGGC CGAGGGCACC
GCCCAGCTCG TGCAGGATCT GAGCGCGGCC GCCGCCAAGA TCGGCGACGT GGTGGGCCTG
ATCTCCACCA TTGCCGGCCA GACCAACCTG CTGGCGCTCA ACGCCACCAT CGAGGCGGCC
CGCGCCGGCG AGGCGGGGCG CGGCTTCGCG GTGGTCGCCG CCGAGGTCAA GGAGCTCGCC
AACCAGACGG CGCGGGCGAC CGACGAGATC TCGGGTCAGA TCGGTCAGGT GCAGTCCATC
ACCGGTCAGG CGGTCACGGC CATCGCCGAC ATCGCCACGC GCATCCGCGA GATCGACGGG
CTCGCCGGCA CCATCGCCGC GGCGGTGGAG GAGCAGGGCG CGGCGACGCA GGAGATCGTG
CGCAACGTCT CCGAGGCATC CGCCGGCACC GGCGCGGTGA CGGGCAATGT CGCCAGCGTC
GCCTCGGCGG CCGAGGAGAC CGGCGCGGCG GCGAGCCAAG TGCTGACCTC GGCCTCCGAG
CTGTCGCGCC AGTCCGAGCA TCTCGACGGA CAGGTCCGCC ACTTCCTGCA GACCATCCGG
GCGGCCTGA
 
Protein sequence
MRALTNLPVV AKLVLVFALV IAAVSGSSFT SWRSLGTIEE SNRWRDHSYE VLLQLDRLTG 
ALVDQETGLR GYLISADPSF LEPYNSGAKT YGETLRRLRG LVSDNPQQVS RLDALDAATR
QWIGDVAERE IALMRNEATQ AQARQIEASG AGKSAMDAVR KAAAEIASSE TSLLEVRAAT
VKDAAASSRF AVGAGFVALL VVAGLGILVL NGFVSRPVRR MTALMGRLAE GDASVEIPFR
ERREEVGAMA NAVQVFKDNL IRTRALEEET ALARAGAEAQ RKAAMREMAD NFERAVSGIV
GAVSSAATEL QATAESMAGT AAQTAGQSSA AAAAAEEAAT NVGTVAAAAE ELGASVQEIA
RQVTGSTSLA QKAVVEAEGT AQLVQDLSAA AAKIGDVVGL ISTIAGQTNL LALNATIEAA
RAGEAGRGFA VVAAEVKELA NQTARATDEI SGQIGQVQSI TGQAVTAIAD IATRIREIDG
LAGTIAAAVE EQGAATQEIV RNVSEASAGT GAVTGNVASV ASAAEETGAA ASQVLTSASE
LSRQSEHLDG QVRHFLQTIR AA