Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mpop_1139 |
Symbol | |
ID | 6310077 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methylobacterium populi BJ001 |
Kingdom | Bacteria |
Replicon accession | NC_010725 |
Strand | + |
Start bp | 1215785 |
End bp | 1217026 |
Gene Length | 1242 bp |
Protein Length | 413 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 642649857 |
Product | urea ABC transporter, urea binding protein |
Protein accession | YP_001923846 |
Protein GI | 188580401 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0683] ABC-type branched-chain amino acid transport systems, periplasmic component |
TIGRFAM ID | [TIGR03407] urea ABC transporter, urea binding protein |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 38 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGCTCGC GTGACCGAAA CGATAGCCAC TTCCATCTCC GACGCCGCCT TCTCCTCGGG CTCGCCGCCT CTCCGCTTCT GGGCGCCCTG CCCGGCCGCG CCTTCGCGCA GGCCGGCGCG GGCGCGCTCG CCGTGACCGA TAAGGAGGTG AGCGTCGGAA TCCTCCACTC GATCAGCGGC ACCATGGCGA TGTCGGAGAC GGGTGCGACC CAGGGTGAGA GGCTCGCCAT CGAGCAGATC AACGCGGGCG GCGGCATCCT CGGCCGCCAG ATCAAGATCA TCCAGGAGGA CGGGGCCTCC GATTGGCCGA CCTTCGCCGA GAAGGCGCGC AAGCTCGTCG TCAACGACCA TTGCGCCGCG GTGTTCGGCT GCGTGACCTC CGCCTCGCGC AAGGCGGTTC TTCCGGTGTT CGAGCAGTAT AACGGCCTGC TCTACTATCC GACTTATTAC GAGGGTCTGG AGCAGTCCAA GAACGTGATC TACACCGGCC AGGAGGCGAC CCAGCAGACG CTGGTGGCCC TCGACTGGGT GACGAAGGAG AAGGGTGCGA AGACCTTCTT CATGGTCGGA TCGGACTACA TCTGGCCGCG CACGACCAAC AAGATCGCCA CGAAGCACAT CGCCAACGTG ACCAAGGGCA GCATTGTCGG CGAGGAGTAC TTCCCCCTCG GCCACACGCA GTTCAACTCG GTCATCAACA AGATCAAGCT GAAGAAGCCG GACGTAATCT TCGCCACCGT CGTCGGCGGT TCGAACGTGG CGTTCTACAA GCAGATCAAG GCGGCGGGCA TCGACCTCAA GAAGCAGACG CTGATCACGG TCTCCGTCAC CGAGGACGAC GTGGACGGCA TCGGCGGTGA GAACATCGCC GACGCCTATT CCTGCATGAA GTACTTCCAG TCGATCAAGA CGCCGGCCAA CGAGAAGTTC GTCGCAGACT TCAAGAAGCG CTGGGGCGAC AAGACCGTCA TCGGCGACGT GACCCAGGCC GCCTATCTGA GCCCGTTCCT GTGGAAGACG GCGGTGGAGA AGGCCGGCAC CTTCGATGTC GACAAAGTCA TCGCGGCATC CCCCGGCATC GAGATGAAGG ATGCGCCGGA GGGCTACGTG AAGATCCACG AGAACCATCA CCTCTGGGCG AAGACCCGCG TGGCACGGGC ACGGGCGGAC GGCCAGTTCG ACGTGGTCTA CGAGAGCCCC GAGCTGATCG AGCCCGATCC GTTCCCGAAG GGCTATCAGT AG
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Protein sequence | MRSRDRNDSH FHLRRRLLLG LAASPLLGAL PGRAFAQAGA GALAVTDKEV SVGILHSISG TMAMSETGAT QGERLAIEQI NAGGGILGRQ IKIIQEDGAS DWPTFAEKAR KLVVNDHCAA VFGCVTSASR KAVLPVFEQY NGLLYYPTYY EGLEQSKNVI YTGQEATQQT LVALDWVTKE KGAKTFFMVG SDYIWPRTTN KIATKHIANV TKGSIVGEEY FPLGHTQFNS VINKIKLKKP DVIFATVVGG SNVAFYKQIK AAGIDLKKQT LITVSVTEDD VDGIGGENIA DAYSCMKYFQ SIKTPANEKF VADFKKRWGD KTVIGDVTQA AYLSPFLWKT AVEKAGTFDV DKVIAASPGI EMKDAPEGYV KIHENHHLWA KTRVARARAD GQFDVVYESP ELIEPDPFPK GYQ
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