| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mpop_1078 |
|---|
| Symbol | |
|---|
| ID | 6312807 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylobacterium populi BJ001 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010725 |
|---|
| Strand | + |
|---|
| Start bp | 1150663 |
|---|
| End bp | 1151445 |
|---|
| Gene Length | 783 bp |
|---|
| Protein Length | 260 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 74% |
|---|
| IMG OID | 642649799 |
|---|
| Product | alpha/beta hydrolase fold |
|---|
| Protein accession | YP_001923788 |
|---|
| Protein GI | 188580343 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0596] Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) |
|---|
| TIGRFAM ID | [TIGR03611] pyrimidine utilization protein D |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 5 |
|---|
| Plasmid unclonability p-value | 0.045467 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 20 |
|---|
| Fosmid unclonability p-value | 0.0264161 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCCGCGC CCGTCCACCA CGCGCTGCAC GGGCCGGAGG GCGCGCGCAC CGTGCTGCTC
TCGCCCGGGC TCGGCGGCTC GGCGCATTAC TTCGCGCCGC AAGTGCCGGC GCTGGCCGAG
CGCTTCCGGG TCGTCACCTA CGATCACCGC GGCACCGGGC GCTCGCCGGG TCCGCTGGAG
CCGGGTCACG ACATCGCGGC CATGGCCCGC GACGTCCTCG CCCTGCTCGA CCATCTCGGC
ATCGGCACGA CCGACATCGT CGGCCACGCG CTCGGCGGCC TCATCGCCCT GCACCTCGCC
CTCACCCATC CCGAGCGGGT CGAGCGGATC GTGGTGATCA ACGGCTGGGC GGTGATGGAC
CCGGCGACCC GCCGCTGCTT TTCCGCCCGC AAGGCGCTGC TGACGCAAGC AGGCCCCGAA
GCCTTCGTGC GCGCACAAGC CATCTTCCTC TACCCCGCGC CCTGGCTGTC GGAGAACGCC
GCGCGAGTCG CGGACGACGA GGCGCAGGCG CTGGCGCATT TCCCCGGCGC CAAGACGGTG
CTGGCGCGCA TCGCCGCGCT GGAGGCGTTC GACGCGACGG CTGCGCTCGC GCGCATCCCG
CACGAGACCC TGCTCATGGC TGCGCGCGAC GACGTGCTCG TGCCCTTCAC CGCCTCGGAC
GCCCTCGCGG CCGGGCTCCC CAACGCCCGC CTCGACCTCG CACCCGAGGG CGGCCACGCC
CACAGCGTCA CCCGCCCCGA CGCCTTCAAC CGCACGCTCC TCGACTTCCT CGCAAGCCCC
TGA
|
|---|
| Protein sequence | MAAPVHHALH GPEGARTVLL SPGLGGSAHY FAPQVPALAE RFRVVTYDHR GTGRSPGPLE
PGHDIAAMAR DVLALLDHLG IGTTDIVGHA LGGLIALHLA LTHPERVERI VVINGWAVMD
PATRRCFSAR KALLTQAGPE AFVRAQAIFL YPAPWLSENA ARVADDEAQA LAHFPGAKTV
LARIAALEAF DATAALARIP HETLLMAARD DVLVPFTASD ALAAGLPNAR LDLAPEGGHA
HSVTRPDAFN RTLLDFLASP
|
|---|
| |