Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mpop_1027 |
Symbol | |
ID | 6309411 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methylobacterium populi BJ001 |
Kingdom | Bacteria |
Replicon accession | NC_010725 |
Strand | + |
Start bp | 1093839 |
End bp | 1094729 |
Gene Length | 891 bp |
Protein Length | 296 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 642649749 |
Product | transcriptional regulator, LysR family |
Protein accession | YP_001923738 |
Protein GI | 188580293 |
COG category | [K] Transcription |
COG ID | [COG0583] Transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.781525 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 35 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TTGGATTGGG ACAAGATCCG GATTTTCCTC AACGTCGCGG AAGCCGGCAG CTTCACGCGG GCGGGCGACG ACATCGGCCT CAGCCAGTCG GCAGTGAGCC GCCAGATCAG CGCCCTGGAG CGCGAACTGA AGGCGCCGCT GTTCCATCGC CACGCCCGCG GCCTGATCCT CACCGAGCAG GGTGACCTGC TGTTCCGCGC CGCCCGCGAC ATGAAGCTCA GGCTCGAGAA CACCCGCGCC CGTCTCGTGG AGACCAGCGA GCGCCCCTCC GGCGACCTGC GGGTGACGAC GACGGTGGGG CTGGGCACCT CCTGGCTGTC GCAGCGCGTC TCCGAGTTCC TCGACCTCTA TCCCGACGTG CGCATCGAAC TGGTGCTCAC CAACGAGGAA CTCGACCTCG CCATGCGCGA GGCCGACATC GCCATCCGCA TGCGGCGCCC GGCCCAGCCC GACCTGATCC AGCGCCGGCT GTTCACGGTG CATTATCACG CCTTCGCGAG TCCCGATTAC GTCAAGCGCT TCGGCGAACC CAAGACCATC GCCGATCTCG ACGAGCATCG GCTCGTCTCG TTCGGCGGCA ATGAGCCGTC CTACCTGCTC GCCACCCACT ATCTCGCCAG CATCGGCCGC GAGGGCGACG ACCGCCGCCC GGTCCACTTC ACGGTCAACA ACATCGCCGC GCTCCACAAG GCGATGGAGG CGGGCATCGG CGTCGGCATC CTGCCGGACT ACGCCGTCGA TGGGAACGAG AGCCTCGTGC AGGTGCTGCG CGAGAGCGAG ATGCCGACCA TGGAGAGCTA TCTCGTCTAC GCCGAGGAGA TGCGCTCGGT CGCCCGCGTC CAGGCGTTCC GCGACTTCCT CGTGAACAAG GCGCAGCGCT GGACTTATTG A
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Protein sequence | MDWDKIRIFL NVAEAGSFTR AGDDIGLSQS AVSRQISALE RELKAPLFHR HARGLILTEQ GDLLFRAARD MKLRLENTRA RLVETSERPS GDLRVTTTVG LGTSWLSQRV SEFLDLYPDV RIELVLTNEE LDLAMREADI AIRMRRPAQP DLIQRRLFTV HYHAFASPDY VKRFGEPKTI ADLDEHRLVS FGGNEPSYLL ATHYLASIGR EGDDRRPVHF TVNNIAALHK AMEAGIGVGI LPDYAVDGNE SLVQVLRESE MPTMESYLVY AEEMRSVARV QAFRDFLVNK AQRWTY
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