Gene Mpop_0907 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMpop_0907 
Symbol 
ID6312715 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium populi BJ001 
KingdomBacteria 
Replicon accessionNC_010725 
Strand
Start bp960867 
End bp962240 
Gene Length1374 bp 
Protein Length457 aa 
Translation table11 
GC content71% 
IMG OID642649623 
Productresponse regulator receiver modulated diguanylate cyclase 
Protein accessionYP_001923620 
Protein GI188580175 
COG category[T] Signal transduction mechanisms 
COG ID[COG3706] Response regulator containing a CheY-like receiver domain and a GGDEF domain 
TIGRFAM ID[TIGR00254] diguanylate cyclase (GGDEF) domain 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.401363 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value0.40647 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCGCTC GCGTCCTGAT CGTGGATGAT CTCTACCCCA ACGTCCGATT GCTCGAGACG 
AAGCTGTCTC TCGAGTATTT CGACGTGGCC GTGGCGATGA ACGGGCCCGA CGCGCTGGCG
ATCTGCGAGA AGGGTGCCTG CGACGTCGTG CTCCTCGACG TGATGATGCC GGGCATGGAC
GGGTTCGAGG TCTGCCGCCG GCTGAAGTCG AACCCCGTGA CCGCCCATCT GCCGGTGGTG
ATCGTCACCG CCCTCGACCA GCCCGCCGAC CGGCTGCGCG GCCTCGACGC CGGGGCCGAC
GACTTCCTGA CCAAGCCCAT CGACGACACC GCGCTGATGA CGCGGGTGCG CAGCCTCGTG
CGACTGAAGG CGGTCACCGA CGAGTTGCGC TCGCGCGCCC TGGCGACCCG GGAGATCGGC
GGGCCCGATC CCCTGGCGCT GGCTGCCGCC GACACCGGCG AGGGCGCCCG CATCCTCCTC
GTGGAGGATC GGCCGAGCGC CATCGACCGG ATCGGCACGG CGCTCTCGCA GCACCATCAG
GTCACCGTCG AGACCGATCC GCACCGGGCC CTGGTGCGGG CGCCGGAGGG CGGGTTCGAC
CTCGCCCTGG TGAGCCTCGA CCTCGAAGGA TTCGACGGCC TGCGCCTGTG CAGCCAGATC
CGCTCGCTGG AGCGGACCCG CAACATGGCG CTGATCATGA TCGGCGAAAT GCACGAGAAG
GCCCGCATCA CCCGCGGCCT CGATTTCGGC GTCAACGACT ACCTGCTGCG CCCGATCGAC
CGCAACGAAC TGATCGCGCG GGTCCGCACG CAGGTGCGGC GGCGGCGCTT CTCGGAGACC
CTGCGCGGGG CGCTCCAGGC CTCGATGGAA CTGGCGATCA CCGACGACCT GACGGGGCTG
CACAACCGGC GCTACCTCGA CCGGCATCTC GGCCCGGTCT TCGGCGAGGC GGCGCTGCAG
CAGAAGGGCC TCGCCTGCCT GCTCCTCGAC ATCGACCGCT TCAAGTCGAT CAACGACACC
TACGGCCACG AGGCCGGCGA CGAGGTGCTG CGCGCCTTCG CCGAGCGCAT CCGCCAGTAC
GTGCGGCCGA TGGACATCCT GGCCCGCTAC GGCGGCGAGG AGATCGTGAT GGTGGTGCCC
GGCGCGGAAC TGCCCGATGC CCGCGCCATC GCAGAGCGCA TCCGCGAGCG GATCGAGGCG
ACGCCGTTCG CGATCGACGG GGGAACCCGC GACATCGGCG TGACCGTCTC GGTCGGCGTC
TCCGTGCGCC GCACCACCGA TACCGGCCCG GCCGACCTGC TCAAGCGCGC CGACACCGCC
CTCTACCGCG CCAAGTCCTC GGGCCGGAAC CGGGTCGAGG CGGCGGCGGC GTAG
 
Protein sequence
MSARVLIVDD LYPNVRLLET KLSLEYFDVA VAMNGPDALA ICEKGACDVV LLDVMMPGMD 
GFEVCRRLKS NPVTAHLPVV IVTALDQPAD RLRGLDAGAD DFLTKPIDDT ALMTRVRSLV
RLKAVTDELR SRALATREIG GPDPLALAAA DTGEGARILL VEDRPSAIDR IGTALSQHHQ
VTVETDPHRA LVRAPEGGFD LALVSLDLEG FDGLRLCSQI RSLERTRNMA LIMIGEMHEK
ARITRGLDFG VNDYLLRPID RNELIARVRT QVRRRRFSET LRGALQASME LAITDDLTGL
HNRRYLDRHL GPVFGEAALQ QKGLACLLLD IDRFKSINDT YGHEAGDEVL RAFAERIRQY
VRPMDILARY GGEEIVMVVP GAELPDARAI AERIRERIEA TPFAIDGGTR DIGVTVSVGV
SVRRTTDTGP ADLLKRADTA LYRAKSSGRN RVEAAAA