Gene Mpop_0516 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMpop_0516 
Symbol 
ID6308859 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium populi BJ001 
KingdomBacteria 
Replicon accessionNC_010725 
Strand
Start bp555355 
End bp556833 
Gene Length1479 bp 
Protein Length492 aa 
Translation table11 
GC content68% 
IMG OID642649217 
Productglucose-6-phosphate 1-dehydrogenase 
Protein accessionYP_001923229 
Protein GI188579784 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0364] Glucose-6-phosphate 1-dehydrogenase 
TIGRFAM ID[TIGR00871] glucose-6-phosphate 1-dehydrogenase 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value0.455459 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGGCCACCA TCATCCCCGT CTCGCCCTTC GACTACGTCG TGTTCGGCGC CACCGGCGAC 
CTCACCCAGC GCAAGCTCCT GCCGGCCCTC TACCAGCGTT ACCGCGACGC TCAGATCCCG
GAGACGAGCC GCATCATCGG CGCCTCGCGC AGTCACATGA CCGTCGAGGA ATTCCGAGAG
CACGCCCGTG ACGCCCTGAA GAGCTTCGTG CCGCCGGCCG AGATCGACGA GAGCAAGCTC
GCCGGCTTCC TCGATCATCT GTTCTACGTG GCGGTCGACG CCCTGGGCGA CGAGGGTTGG
GACGACCTGA AGCGCCTGCT CGACGAGCGG CCCGACCGGA TCCGACCCTA TTATCTTGCG
ACCTCGCCCG ATCTCTACGG CTCGATCTGC CGGAACCTCG ACCGCTACGG CCTGATCGGC
GAGAACAGCC GGGTCGTCCT CGAAAAGCCG ATCGGCAAGG ATCTCAAATC GGCCCGCGCC
ATCAACGACG CGGTCGGCGC CGTGTTTCCC GAGAGCCAGA TCTTCCGCAT CGACCATTAC
CTCGGCAAGG AGACGGTGCA GAACCTGCTG GCGCTGCGCT TCGCCAACAC CATCTTCGAG
CGGCTCTGGA ACGCCGACGT GATCGACCAC GTGCAGATCA CGGTCGGCGA GACGGTCGGC
GTCGAGGGGC GCGGCGGCTA CTACGACACC TCCGGCGCCC TGCGCGACAT GGTGCAGAAC
CACATCCTCC AGCTCCTCTG CCTCACGGCG ATGGAGAGCC CGATCTCCCT CGACGCCAAC
TCCGTGCGCG ATGAGAAGCT GAAGGTGCTG CGCGCGCTCA AGCCCATCAC CGCCGCGGAC
GTCCAGGCCG TGACGGTGCG CGGGCAATAC GCGGCGGGCG CGGTCGGCGG GCGGCCGGTG
GAGGGCTACC AGTCCGACCT CGGCAGTGAT GCCACGAGCC GGACCGAGAC CTTCGTCGCC
CTCAAACTCG AAGTCCGCAG CGGGCGCTGG GCCGGCGTGC CGTTCTACGT CCGCACCGGC
AAGCGCCTGC CCAAGAAGCT GTCGGAGATC GTGGTGCAGT TCCGCGCCTC GCCCTTCTCG
ATCTTCCCCG CCGATGCCTT CGGGCGCGAG CCGAACCGCC TCGTCATCCG CCTCCAGCCG
GAGGAGGGGA TGAAGCTCGA AGTGATGACG AAGGATCCGG GCCCCGGCGG CATGCGCCTG
CGCCCGACCA ATCTCGACAT CTCCTTCGAG GAGACGTTCA AGCAGCGCTA TCCCGATGCC
TACGAGCGCC TGCTGATGGA CGTGGTGCGC GGCAACGCGA CCCTGTTCAT GCGCCGTGAC
GAGGTGGAGG TGGCCTGGGC CTGGGCCGAC ACCCTGCTCA AGGCCTGGGC CGACCGTCCC
GAGCCGCCGC GTCCCTACGC CGCCGGAAGC TGGGGACCGA CCGCCGCGAT CGCCCTGATC
GAGCGCGACG GCCGCACTTG GCACGAAGAA ATCGGCTGA
 
Protein sequence
MATIIPVSPF DYVVFGATGD LTQRKLLPAL YQRYRDAQIP ETSRIIGASR SHMTVEEFRE 
HARDALKSFV PPAEIDESKL AGFLDHLFYV AVDALGDEGW DDLKRLLDER PDRIRPYYLA
TSPDLYGSIC RNLDRYGLIG ENSRVVLEKP IGKDLKSARA INDAVGAVFP ESQIFRIDHY
LGKETVQNLL ALRFANTIFE RLWNADVIDH VQITVGETVG VEGRGGYYDT SGALRDMVQN
HILQLLCLTA MESPISLDAN SVRDEKLKVL RALKPITAAD VQAVTVRGQY AAGAVGGRPV
EGYQSDLGSD ATSRTETFVA LKLEVRSGRW AGVPFYVRTG KRLPKKLSEI VVQFRASPFS
IFPADAFGRE PNRLVIRLQP EEGMKLEVMT KDPGPGGMRL RPTNLDISFE ETFKQRYPDA
YERLLMDVVR GNATLFMRRD EVEVAWAWAD TLLKAWADRP EPPRPYAAGS WGPTAAIALI
ERDGRTWHEE IG