Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mpop_0514 |
Symbol | |
ID | 6308731 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methylobacterium populi BJ001 |
Kingdom | Bacteria |
Replicon accession | NC_010725 |
Strand | + |
Start bp | 551908 |
End bp | 554268 |
Gene Length | 2361 bp |
Protein Length | 786 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 642649215 |
Product | PAS/PAC sensor signal transduction histidine kinase |
Protein accession | YP_001923227 |
Protein GI | 188579782 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG0642] Signal transduction histidine kinase |
TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 0.292682 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCGGGGG CGGTTTCCGC GTCCCTGTCC GCGCGCGCGC GTGCGGACAC GATCCTCGGG ATCCAACGCA CGACCGGCAC CGCCCAGGCC CGCCTCATCC GGGCGGAGAC GTGGTTGCGC TACGCGCTTC CGGCGCTGCT CGTCGTCTTC ATGCTCACGC TGCTCGGCGT GGCGGTCCTG CAGCTGCGCG GGCGCCACGA CGAGGCGGTG CGCGCGGCCA CCCGCGAGGT GGAGGCCTTC GCCCGCCTCG CCGCCCTGGC GCTGTCGAGC GAGGCGGCCG CCACCGAGAC ACAGCTTGAG CGTGTCCTGC CGGTCCATCT CCTGCCGGCC GGCCGAGAGG TCCTGCTGAT CGGCCCCACC GGCCGGATCC GTGCCGCCTA TCCGCGTCCC GCCCCATCCG ACACCTTCGC GAGCTACCTC GCGGAGGGCG AGCCCATCGC CTTCCTCGGC GAGAGCGCCG GGGCGATGAC CGTGAACCTG CAGGCGGGCG GGCAGGCCGT CGTCGCGACC CGCCGCTTGG CCGACGGGTT GGGTGAAGTC GCCGTGCTCC AGCGATTCGA ACCGCTCACC GCCAACTGGT GGCGGATGTT CGGGCACCAC GCGATCTCGC TCTCGGCCAT CGGCCTCGTG CTGGCAGGGA TGGCCACGGC CTACATCCTG CAGACGCAGC GGGCGCAGGC GGCCGACGAG GTGTGCGATC TCGTCAAGCA GCGTCTCGAC ACGGCGCTCG GCCGCGGGCG CTGCGGCCTG TGGGACTGGG ACATCGCCCG CGGCACCATC TTCTGGTCCG ACTCCATGTA TGCCCTGCTG GGCTACACCC CGGAGAAGGA TCTCCTCTCC TTCGGCGACG TGAACGCCCT GCTGCACAGC GAGGACGGCG ACCTCTACAG CCTCGCCCGC CATCTCGCCG CGAGCCACGC CACCGTCGAT CACGAGTTCC GCATCCGCGA TGCGTCGGGC GACTGGATCT GGCTGCGCAC CCGCGCCGAG ATCGTCGAGG ATGCGCTCGA CGGCAGCCGC CACCTCGTCG GCATCGCTAT GGATGTCACC GAGCAGCGCC GGCTGGCCGA GTTCACCGCC ACCGCCGACA TGCGTCTGCG CGACGCGGTG GAGGCGATCT CCGAAGCCTT CGTGCTGTGG GATGCCGGCA ACCGGCTGGT GCTGTGCAAC TCCAAATTCC GCGACCTGCA CGCGCTCGAC AGCGAGGACG CGGTGCCGGG CCGGCGCTAC GACGAGATCA TGGGCCGCGG CGCCCTCCCC CCGGTCCGTC GGGGCATTCC GGGCGCCGAG CGCGGCACCT CGCGCACCTT CGAGGTCGAA CTGACCGACG GCCGCTGGCT CCAGGTCAGC GAGCGCCGCA CCAAGGATGG CGGCTACGTC TCGGTCGGCA CCGACATCAC CAGCCTGAAG CGCCACCAAG AGCAGCTCGT CGCCTCCGAG CGCGAGCTGA TCGAGACGGT CAAGGACCTC AAGCGCTCGC GGCGCACCCT GGAGACCCAG ACGCAGCAGC TCGCCGACCT TGCCGAGCGC CATCTCGACC AGAAGGCGAG AGCCGAGATC GCCAACCAGG CCAAGTCCGA GTTCCTGGCC AATATGAGCC ACGAGCTGCG CACGCCGCTC AACGCCATCA TGGGCTTCGC CGAGCTGATG GAGAGCGAGG TCTACGGCTC GCTCGGCTCC CCCCGCTACG CCGATTATTG CCGCGACATC CAGCAGAGCG GGACCTACCT GCTCTCGGTC ATCGACGACA TCCTGCACAT GTCGCGCATC GAGGCGAACC GGGTGAAGCT CGTACGCCGC GAGATCGGCC TGGACGCGGC GATCGCCGCG GCGGTGACGC TGGTGTCCAA GGAGGCGGCG AGCAAGTCCG TCGCCATCGA CATCGAACTG GCCGGCACCC TGAACGTCCT GGCCGACGAG CGGGCGCTCC ACCAGATCCT GCTCAACATC ATCCAGAACG CGGTGAAGTT CACCCCCGAG GGCGGTCGCG TCGCCCTGCG CGGCCGCTCC TGCAACGGCT TCGCCCACCT CTTCATCGGC GATACCGGCA TCGGCATCCC CAAGGCGGCG ATCTCCAAGC TCGGGCGGCC GTTCGAGCAG GTCGAGACCA ACCTGACCCG CAGCTACAAG GGCTCCGGAC TCGGCCTCGC CATCGCCCGC TCCACCGCGG AGCTGCATGG CGGATCGCTG CGCATCCGCT CGGAGGAAGG CGTCGGCACC CTGGTTCTGG TTCGCCTGCC GATGCCGACG CCCGCGCGCC TCGCCGAGAT CGCCCGCGAC ACCGAGCGGG ACACGCTGGC GGCGATCAGC GAGCTGGCGG GCGTGACCCG GGCCAAGGGC GGCACCATCG CCGCCCTGTG A
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Protein sequence | MSGAVSASLS ARARADTILG IQRTTGTAQA RLIRAETWLR YALPALLVVF MLTLLGVAVL QLRGRHDEAV RAATREVEAF ARLAALALSS EAAATETQLE RVLPVHLLPA GREVLLIGPT GRIRAAYPRP APSDTFASYL AEGEPIAFLG ESAGAMTVNL QAGGQAVVAT RRLADGLGEV AVLQRFEPLT ANWWRMFGHH AISLSAIGLV LAGMATAYIL QTQRAQAADE VCDLVKQRLD TALGRGRCGL WDWDIARGTI FWSDSMYALL GYTPEKDLLS FGDVNALLHS EDGDLYSLAR HLAASHATVD HEFRIRDASG DWIWLRTRAE IVEDALDGSR HLVGIAMDVT EQRRLAEFTA TADMRLRDAV EAISEAFVLW DAGNRLVLCN SKFRDLHALD SEDAVPGRRY DEIMGRGALP PVRRGIPGAE RGTSRTFEVE LTDGRWLQVS ERRTKDGGYV SVGTDITSLK RHQEQLVASE RELIETVKDL KRSRRTLETQ TQQLADLAER HLDQKARAEI ANQAKSEFLA NMSHELRTPL NAIMGFAELM ESEVYGSLGS PRYADYCRDI QQSGTYLLSV IDDILHMSRI EANRVKLVRR EIGLDAAIAA AVTLVSKEAA SKSVAIDIEL AGTLNVLADE RALHQILLNI IQNAVKFTPE GGRVALRGRS CNGFAHLFIG DTGIGIPKAA ISKLGRPFEQ VETNLTRSYK GSGLGLAIAR STAELHGGSL RIRSEEGVGT LVLVRLPMPT PARLAEIARD TERDTLAAIS ELAGVTRAKG GTIAAL
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