Gene Mpop_0405 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMpop_0405 
Symbol 
ID6311991 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium populi BJ001 
KingdomBacteria 
Replicon accessionNC_010725 
Strand
Start bp436425 
End bp437855 
Gene Length1431 bp 
Protein Length476 aa 
Translation table11 
GC content71% 
IMG OID642649105 
Productintegral membrane sensor signal transduction histidine kinase 
Protein accessionYP_001923118 
Protein GI188579673 
COG category[T] Signal transduction mechanisms 
COG ID[COG0642] Signal transduction histidine kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.152478 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value0.901821 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAGTCCGT CCGCCGCATC GCCGCCGCAG GACGGGCTCT TCGCGCGGCT CGGCAAGGTC 
TTCCGCACGA CCGCGTTCAA GCTCTCGCTC GCCTATCTCG TGCTGTTCGC GGTGCTGGCC
TCGCTCGGCC TCGGCTACGT CGCCTGGAAC GCCCGGCGGG TGCTCGACGA CCAGATCGTC
TCGACCATCG ACGCCGAGAT CAACGGCCTG TCCGAGCAGT ACACCGCCGG CGGGCTGCGC
CGCCTCATCG CCGTGGTGGA GCGCCGGGCC AAGGAGCCGG GCGCCTCGCT CTATCTCGTC
ACGACGCCCG CGGGCGAGCA CATCGTCGGC AATGTCAGCC GCGTCTCGGC CGACATCCTC
GCCCGGCCCG GCCAGTACGA GGGTTTCTAC GGGCGCGGCA CGGAGTCGGA TCAGAGTGAG
CATCGCGCGA TCATGCGGGT CTTCACCCTG GCCGGGGGCT TCCGCCTCCT CGTCGGACGC
GACACCGAGG AGCGCGACCG GCTGCGCGCG GCCATCGGCA ACACCTTCGG CTCGTCGCTG
GCGCTGGTGG TGCTGCTCGG CGTGCTCGGC GGCTGGTTCG TGGCCAGCCG CGTCCTCAAG
CGCGTGGACG ACATGACCGA GACGACCCGC ACCATCATGG CGGGCGATCT CGACGGGCGC
CTGCGGGTCG CCGGCACCGG CGACGAACTC GACCGCCTCG CCCAGAACCT GAACCTGATG
CTGGAGCGCA TCGGCGAACT GATGCGCGGC ATGAAGGAGG TCTCCGACAA CATCGCCCAC
GACCTCAAGA CGCCGCTCAC GCGGCTCCGC AACCGGGCGG ACGAGGCCCT GCGCACCGCT
GAAAGCCCGG ACGCGCTTCG GACGGCGATC GAGGGCGTGA TCGAGGACAG CGACGGGCTG
ATCCGCGTGT TCAACGCGTT GCTGACCATC GCTCGGCTCG AGGCCGGCAA TGCGCCCGAG
AGCGTTCGCC GCTTCGATGC CGGCGCGGTG GCGCGGGAGG TGGCCGAACT CTACGAGCCC
CTCGCCGAGG ACAGGGGCCT GAGCCTGACC GTCCGCACCG AGCCGGATCT GATCCTCGAC
GGCAATCGCG AACTGGTGGG GCAGGCGATC GCCAACCTCA TCGACAACGC CATCAAGTAC
GGCGCCCGGT CCGCCGAAGC CGCTCCGCAG GAGATCACGG TCAGCGCCAC GCGGGCCGAC
GACAGGATCC GGCTCACCGT GGCGGACCAC GGCCCCGGCA TCCCGGAAGC CGAGCGCGGC
CGGGTGCTCG ACCGTTTCGT GCGCCTCGAC GCCGCCCGCT CCCGCCCCGG CTTCGGCCTC
GGGCTCAGCC TCGTCAACGC CGTCGCCCGG CTTCACGGCG GCAGCCTCGA CCTCGCCGAC
AACGCACCCG GACTCGCCGT GACGCTGAGC CTTCCGGCCG GCGCGGCCTG A
 
Protein sequence
MSPSAASPPQ DGLFARLGKV FRTTAFKLSL AYLVLFAVLA SLGLGYVAWN ARRVLDDQIV 
STIDAEINGL SEQYTAGGLR RLIAVVERRA KEPGASLYLV TTPAGEHIVG NVSRVSADIL
ARPGQYEGFY GRGTESDQSE HRAIMRVFTL AGGFRLLVGR DTEERDRLRA AIGNTFGSSL
ALVVLLGVLG GWFVASRVLK RVDDMTETTR TIMAGDLDGR LRVAGTGDEL DRLAQNLNLM
LERIGELMRG MKEVSDNIAH DLKTPLTRLR NRADEALRTA ESPDALRTAI EGVIEDSDGL
IRVFNALLTI ARLEAGNAPE SVRRFDAGAV AREVAELYEP LAEDRGLSLT VRTEPDLILD
GNRELVGQAI ANLIDNAIKY GARSAEAAPQ EITVSATRAD DRIRLTVADH GPGIPEAERG
RVLDRFVRLD AARSRPGFGL GLSLVNAVAR LHGGSLDLAD NAPGLAVTLS LPAGAA