Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mpop_0293 |
Symbol | |
ID | 6308742 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methylobacterium populi BJ001 |
Kingdom | Bacteria |
Replicon accession | NC_010725 |
Strand | - |
Start bp | 309948 |
End bp | 312917 |
Gene Length | 2970 bp |
Protein Length | 989 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 642648995 |
Product | formate dehydrogenase, alpha subunit |
Protein accession | YP_001923010 |
Protein GI | 188579565 |
COG category | [R] General function prediction only |
COG ID | [COG3383] Uncharacterized anaerobic dehydrogenase |
TIGRFAM ID | [TIGR01591] formate dehydrogenase, alpha subunit, archaeal-type |
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Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 31 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCAACG GCCCCGAAGT GCACGGCGAC AAGACCGAGC GGCCCGAGAT CCGCGCCAAC GGCCGGCAGG ATGCCGGCGG TCCGGTGGGT GGCCCGCAGC CGGGCTCCGG CGGCGCCTAC TCGCAGGGCG CTAAGTCCGG CGGCCAGGCC GCGCCCGAGC CCTCGGGCAC CTTCGGCCTC AAGGAAGCCC CGATCGCGCC CGCCACGATC ACGTTCGAGC TCGACGGCCA GCAGGTCGAG GCGCAGCCCG GCGAGACGAT CTGGGCGGTG TCGAAGCGGC TGGGCACCCA CATCCCGCAT CTCTGCCATA AGCCGGAGCC CGGCTATCGG CCGGACGGCA ACTGCCGCGC CTGCATGGTC GAGATCGAGG GCGAGCGCGT GCTCGCCGCC TCGTGCAAGC GCACGCCCGC CATCGGCATG AAGGTGAAGA CCGCGACCGA GCGCGCCACC AAGGCCCGCG CCATGGTGCT CGAACTGCTG GTGGCCGACC AGCCCGAGCG CGCGACCTCG CACGACCCGT CCTCCCACTT CTGGGTGCAG GCCGATTATC TCGACGTCTC GGAGAGCCGC TTCCCGGCCG CCGAGCGCTG GTCGAGCGAC GTCAGCCACC CGGCCATGAG CGTCAATCTC GACGCCTGCA TCCAGTGCAA TCTCTGCGTC CGAGCCTGCC GCGAAGTCCA GGTCAACGAC GTGATCGGCA TGGCCTACCG TTCGGCGGAC TCCAAGGTCG TGTTCGACTT CGACGACCCG ATGGGCGCCT CGACCTGCGT CGCCTGCGGC GAGTGCGTCC AGGCCTGTCC GACCGGCGCG CTGATGCCGT CAGCCTATCT CGACGCGAAC CAGACCCGCA CGGTCTATCC CGACCGCGAG GTGAAGTCGC TTTGCCCCTA TTGCGGCGTC GGCTGCCAGG TCTCCTACAA GGTCAAGGAC GAGAAAATCG TCTATGCCGA GGGCGTCAAC GGCCCGGCCA ACCACAACCG CCTCTGCGTG AAGGGCCGCT TCGGTTTCGA CTACGTCCAC CATCCCCACC GTCTGACGGT GCCGCTGATC CGCCTGGAGA ACGTCCCCAA GGACGCCAAC GATCAGGTCG ATCCGGCCAA CCCCTGGACC CATTTCCGCG AGGCGACGTG GGAGGAGGCG CTCGACCGCG CCGCGGGTGG CCTGAAGACG ATTCGCGATA CGAACGGGCG CAAGGCGCTT GCGGGCTTCG GCTCGGCCAA GGGCTCGAAC GAGGAGGCTT ACCTCTTCCA GAAGCTCGTG CGCCTGGGCT TCGGCACCAA CAACGTGGAT CACTGCACGC GGCTGTGCCA CGCCTCGTCG GTGGCCGCCC TGATGGAGGG CCTGAACTCC GGCGCCGTGA CGGCGCCGTT CTCGGCGGCG CTTGACGCCG AGGTGATCGT GGTGATCGGC GCCAACCCGA CCGTGAACCA TCCGGTCGCC GCGACCTTCC TCAAGAACGC GGTGAAGCAG CGCGGCGCCA AGCTGATCAT CATGGACCCG CGGCGCCAGT CGCTGTCGCG CCACGCTTAT AAGCACCTCG CCTTCCGCAA CGGCACCGAC GTGGCGATGC TCAACGCGAT GCTGAACGTC ATTGTCGAGG AAAAGCTCTA CGATGAGCAG TACATCGCCG GATACACCGA GAACTTCGAC GCGCTGAAGG AGAAGATCGT CGACTTCACC CCGGAAAAGA TGGCGCCCGT GTGCGGCATC GACGCCGAGA CCCTGCGCGA GGTGGCGCGG CTCTACGCCC GGGCCAAGTC CTCGATCATC TTCTGGGGCA TGGGCGTCAG CCAGCACGTC CACGGCACCG ACAACTCGCG TTGCCTGATC GCGCTGGCGC TCATCACCGG CCAGATCGGC CGTCCGGGCA CCGGCCTGCA CCCCTTGCGC GGCCAGAACA ACGTCCAGGG CGCCTCCGAC GCCGGCCTGA TCCCGATGGT CTATCCGGAT TATCAGTCGG TCGAAAAGGC GGCCGTGCGC GAGCTGTTCG AGGAGTTCTG GGGCCAGTCC CTCGATCCGC AGAAGGGCCT CACGGTCGTC GAGATCATGC GCGCGATCCA CGCGGGCGAG ATCAAGGGCA TGTTCGTCGA GGGCGAGAAC CCGGCGATGT CCGACCCCGA CCTCAACCAC GCCCGCCACG CGCTGGCGAT GCTCGACCAT CTCGTGGTGC AGGACCTGTT CCTGACCGAG ACCGCCTTCC ACGCCGACGT GGTGCTGCCG GCTTCCGCTT TCGCCGAGAA GGCCGGCAGC TTCACCAACA CCGACCGGCG CGTGCAGATC GCCCAGCCGG TTGTCGCGCC GCCCGGCGAC GCGCGTCAGG ATTGGTGGAT CATCCAGGAG CTGGCCAAGC GGATGGGCCT CGACTGGAAC TACAGCGGCC CGGCCGACAT CTTCGCCGAG ATGGCGCAGG TGATGCCGTC CCTGAACAAC ATCACCTGGG AGCGGCTGGA GCGTGAGGGC GCGGTGACCT ACCCGGTCGA TGCCCCGGAC CAACCCGGCA ACGAGATCAT CTTCTACGCC GGCTTCCCCA CCGAGAGCGG GCGCGCCAAG ATCGTCCCCG CGGCGATCGT GCCGCCGGAC GAGGTGCCGG ACGCCGAGTT CCCGATGGTG CTCTCGACAG GCCGCGTGCT GGAGCACTGG CACACCGGTT CGATGACCCG GCGCGCGGGC GTGCTCGACG CTCTGGAGCC CGAGGCGGTC GCCTTCATGG CGCCGAAGGA ACTCTATCGC CTGGGACTGC GTCCCGGCGG CGCGATGCGG CTGGAAACGC GGCGCGGTGC CGTCGAGCTG AAGGTGCGCT CCGACCGCGA CGTACCGGCG GGCATGATCT TCATGCCGTT CTGCTACGCC GAGGCCGCCG CCAATCTCCT GACCAACCCG GCGCTCGACC CACTCGGCAA GATCCCCGAG TTCAAGTTCT GCGCCGCCCG CGTCGCCCCC GTGGAGGCCG CACCGATGGC CGCTGAGTGA
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Protein sequence | MSNGPEVHGD KTERPEIRAN GRQDAGGPVG GPQPGSGGAY SQGAKSGGQA APEPSGTFGL KEAPIAPATI TFELDGQQVE AQPGETIWAV SKRLGTHIPH LCHKPEPGYR PDGNCRACMV EIEGERVLAA SCKRTPAIGM KVKTATERAT KARAMVLELL VADQPERATS HDPSSHFWVQ ADYLDVSESR FPAAERWSSD VSHPAMSVNL DACIQCNLCV RACREVQVND VIGMAYRSAD SKVVFDFDDP MGASTCVACG ECVQACPTGA LMPSAYLDAN QTRTVYPDRE VKSLCPYCGV GCQVSYKVKD EKIVYAEGVN GPANHNRLCV KGRFGFDYVH HPHRLTVPLI RLENVPKDAN DQVDPANPWT HFREATWEEA LDRAAGGLKT IRDTNGRKAL AGFGSAKGSN EEAYLFQKLV RLGFGTNNVD HCTRLCHASS VAALMEGLNS GAVTAPFSAA LDAEVIVVIG ANPTVNHPVA ATFLKNAVKQ RGAKLIIMDP RRQSLSRHAY KHLAFRNGTD VAMLNAMLNV IVEEKLYDEQ YIAGYTENFD ALKEKIVDFT PEKMAPVCGI DAETLREVAR LYARAKSSII FWGMGVSQHV HGTDNSRCLI ALALITGQIG RPGTGLHPLR GQNNVQGASD AGLIPMVYPD YQSVEKAAVR ELFEEFWGQS LDPQKGLTVV EIMRAIHAGE IKGMFVEGEN PAMSDPDLNH ARHALAMLDH LVVQDLFLTE TAFHADVVLP ASAFAEKAGS FTNTDRRVQI AQPVVAPPGD ARQDWWIIQE LAKRMGLDWN YSGPADIFAE MAQVMPSLNN ITWERLEREG AVTYPVDAPD QPGNEIIFYA GFPTESGRAK IVPAAIVPPD EVPDAEFPMV LSTGRVLEHW HTGSMTRRAG VLDALEPEAV AFMAPKELYR LGLRPGGAMR LETRRGAVEL KVRSDRDVPA GMIFMPFCYA EAAANLLTNP ALDPLGKIPE FKFCAARVAP VEAAPMAAE
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