| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mpop_0263 |
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| Symbol | |
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| ID | 6309217 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methylobacterium populi BJ001 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010725 |
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| Strand | + |
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| Start bp | 272500 |
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| End bp | 274374 |
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| Gene Length | 1875 bp |
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| Protein Length | 624 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 642648968 |
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| Product | TRAP C4-dicarboxylate transport system permease DctM subunit |
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| Protein accession | YP_001922983 |
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| Protein GI | 188579538 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1593] TRAP-type C4-dicarboxylate transport system, large permease component
[COG3090] TRAP-type C4-dicarboxylate transport system, small permease component |
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| TIGRFAM ID | [TIGR00786] TRAP transporter, DctM subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 31 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAACTCG ATCTGCCCGT GCACGCGGCG GCCCTACCGG CCCCTGGCGA CCGGACTCAG
TTCCAGACCT TCGAGCGGGT CTTCGATCGG ATGATCGACA TCCCGGCGGC GATCCTCGTC
GTGTTGGAGA TCCTCGTGCT CCTGAGCGGC GTCGTCAGCC GCTACGTCCT GCACCAACCC
CTGGTCTGGT CGGACGAACT CGCCACGATC CTGTTCCTGT GGCTGGCCAT GCTGGGGACG
GTCATCGCCT TCCGCCGTGG CGAGCACATG CGCATGACCG CGTTCGTCGG CATGGCCTCG
CCCCGCGGCC GGGCCTTCAT GGACACGCTG GCCATCGTGG CCGGCCTCGT CTTCGTCGGC
CTGCTCCTCG AGCCCGCGTT CGAGTTCGCG AGCGAGGAAT CCTGGGTGCA TACCCCGGCC
CTCAACCTCG CCAACACCTG GCGCGCGGCC GCCCTGCCGG TTGGGTTCGC GCTGATGCTG
GTGACCGCCG TGCTGCGGCT CATGCGCGAG AGCGACTGGC GCATGACCGG CGCCGCTCTG
GCGCTCGGCG CGGCTGTCGC GGCTGTCCTC GCCCTCCTGT CGCCGGTGCT GACGGCGATG
GGCAACTTCA ATCTCTTGGT GTTCTTTCTC CTCGGCGTCG GCTCGCTGGT CTTCGCGGGC
GTGCCGATCG CCTTCGCCTT CGGGCTCTCG ACCTACGCCT ACCTGATGAC CACCACGCAC
GCCCCCGCCA TGGTCGTGGT CGGGCGCATG GACGAGGGCA TGGGCCACCT CATCTTGCTC
GCCGTGCCGC TGTTCATCTT CCTCGGCCTC CTGATCGAGA TGACCGGCAT GGCCCGCGCC
ATGGTCGGCT TCCTGGCAAG CCTGCTCGGG CATGTCCGCG GCGGTCTGCA CTACGTCCTG
ATCGGCGCGA TGTACCTCGT CTCCGGCATT TCGGGCTCGA AAGCTGCCGA CATGGCCGCG
GTCGCACCCG TGCTGTTTCC CGAAATGAAA GCGCGTGGCG CCAAGGAGGG CGATCTCGTC
GCGTTGCTCT CCGCGACGGG CGCCCAGACC GAGACGATCC CGCCCTCGAT CGTGCTCATC
ACCATCGGCT CGGTCACGGG GGTCTCGATC ACCGCCCTGT TCACCGGCGG CCTCCTGCCG
GGCTTCGTCC TCGGCGCGAC GCTCTGCGCT CTGGTCTGGT GGCGCTACCG CGGAGAGGAT
CTTGCCCATG TCGCATGGCC GGGCTGGAGG GCGATCCTGC GCGCCCTCAT GGTGGCGGTC
CCCGCCCTCG CACTACCCTT CGTCATCCGT GTTGCAGTGG TCGAAGGTGT GGCGACGGCC
ACCGAAGTCT CGACGATCGG AATCGTCTAC GCGGTGCTGG CGGGACTCCT CATCTACCGG
CAGTTCGACT GGCGCCGCCT CCTACCCATG CTGGTGACGA CAGCGACGCT GTCGGGTGCG
ATCCTCCTGA TTATCGGCGC GGCGACCGCC ATGGCCTGGG CGCTCACGCA ATCCGGCTTC
TCGCAAGCGC TCGCTGCGGC GATGAAGGAC CTGCCCGGCG GCGCGCTCGG TTTCCTCGTC
GTCTCCGCCC TCGCCTTCAT CGTGCTGGGC TCGGTGCTAG AGGGCATCCC CGCAATCGTT
CTGTTCGGGC CATTGCTGTT CCCGATCGCC CGGGCGGTGG GCGTGCACGA GGTCCACTAT
GCGATGGTCG TGATCCTCGC CATGGGCATC GGGCTGTTCG CGCCGCCCTT CGGCGTCGGC
TACTACGCCG CCTGCGCCAT CAGCCGGATC AATCCCGATG TCGGCATGCG GCCCATCGTC
GGTTACATGG CGGCCCTGAT GATCGGCCTT GCCGCGATCA TCCTGGTGCC CTGGTTCTCG
ATCGGCTTCC TCTGA
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| Protein sequence | MQLDLPVHAA ALPAPGDRTQ FQTFERVFDR MIDIPAAILV VLEILVLLSG VVSRYVLHQP
LVWSDELATI LFLWLAMLGT VIAFRRGEHM RMTAFVGMAS PRGRAFMDTL AIVAGLVFVG
LLLEPAFEFA SEESWVHTPA LNLANTWRAA ALPVGFALML VTAVLRLMRE SDWRMTGAAL
ALGAAVAAVL ALLSPVLTAM GNFNLLVFFL LGVGSLVFAG VPIAFAFGLS TYAYLMTTTH
APAMVVVGRM DEGMGHLILL AVPLFIFLGL LIEMTGMARA MVGFLASLLG HVRGGLHYVL
IGAMYLVSGI SGSKAADMAA VAPVLFPEMK ARGAKEGDLV ALLSATGAQT ETIPPSIVLI
TIGSVTGVSI TALFTGGLLP GFVLGATLCA LVWWRYRGED LAHVAWPGWR AILRALMVAV
PALALPFVIR VAVVEGVATA TEVSTIGIVY AVLAGLLIYR QFDWRRLLPM LVTTATLSGA
ILLIIGAATA MAWALTQSGF SQALAAAMKD LPGGALGFLV VSALAFIVLG SVLEGIPAIV
LFGPLLFPIA RAVGVHEVHY AMVVILAMGI GLFAPPFGVG YYAACAISRI NPDVGMRPIV
GYMAALMIGL AAIILVPWFS IGFL
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