Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mpop_0260 |
Symbol | |
ID | 6309214 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methylobacterium populi BJ001 |
Kingdom | Bacteria |
Replicon accession | NC_010725 |
Strand | + |
Start bp | 269441 |
End bp | 270301 |
Gene Length | 861 bp |
Protein Length | 286 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 642648965 |
Product | Transketolase domain protein |
Protein accession | YP_001922980 |
Protein GI | 188579535 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG3959] Transketolase, N-terminal subunit |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 26 |
Fosmid unclonability p-value | 0.509651 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGACACCG TCCTCGACGG GCAGCCCCAC GAACGCTCGA ACGTCTCTCT CGCCGACCGC GCTCACAACA TCCGCCGCCA CGCCCTGCTG ATGGGCGAGG TCCAGGGACA GGGCTACATC GCGCAGGCGC TCGGCATCGC CGACGTGCTG GCGGTCAGCT ACTTCCACGC CTTGACCTAC CGTCCGGACG ATCCGGAATG GGAGGGGCGC GACCGCTTCC TGCTCTCGAT CGGCCATTAC GCCATCGCCC TCTACGCCGC CCTGATCGAG GCCGGCGTCA TCCCCGAGGA CGAACTGACG AGCTACGGTT CCGACGACAG CCGCCTGCCG ATGTCCGGCA TGGCCGCCTA CACGCCGGGC ATGGAGATCA CCGGAGGCTC GCTCGGCCAC GGCCTCGGCA TCGCCGTCGG CATGGCGCTC GGCCTGAAGC GGAAGTCTTC GAACAGCTTC GTCTACAACA TGTTCTCCGA CGGTGAGCTC GACGAGGGCT CGACCTGGGA AGCGGCGATG TCGGCCGCCT CCTTCGGTCT CGACAACCTG ATCGGCATCG TCGACGTCAA CGGCATGCAG GCCGACGGGC CTTCCCGCGG TGTCCTGAAC TTCGAGCCGC TGGCGCCGAA GTTCGAAGCC TTCGGCTGGT TCGTCCAGCG CGTGGACGGC AACGACCTCG ACGCGCTGGT TGAGGCCTTC GATGCGGCCC GAAACCATGC GGGCGCCTGC CCGCGCATCG TGATCTGTGA CACGAAGATG GCCAAGGGTG TGCCGTTCCT CGAGGCGCGG GAGCGAAACC ACTTCCTGCG GGTCGAGGCG GACGAATGGC GCAGAGCCCT GGCGGTTCTG GATGAGGGGA GGCTCCAGTG A
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Protein sequence | MDTVLDGQPH ERSNVSLADR AHNIRRHALL MGEVQGQGYI AQALGIADVL AVSYFHALTY RPDDPEWEGR DRFLLSIGHY AIALYAALIE AGVIPEDELT SYGSDDSRLP MSGMAAYTPG MEITGGSLGH GLGIAVGMAL GLKRKSSNSF VYNMFSDGEL DEGSTWEAAM SAASFGLDNL IGIVDVNGMQ ADGPSRGVLN FEPLAPKFEA FGWFVQRVDG NDLDALVEAF DAARNHAGAC PRIVICDTKM AKGVPFLEAR ERNHFLRVEA DEWRRALAVL DEGRLQ
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