Gene Mpop_0224 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMpop_0224 
Symbol 
ID6309469 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium populi BJ001 
KingdomBacteria 
Replicon accessionNC_010725 
Strand
Start bp229757 
End bp231379 
Gene Length1623 bp 
Protein Length540 aa 
Translation table11 
GC content67% 
IMG OID642648932 
ProductABC transporter related 
Protein accessionYP_001922947 
Protein GI188579502 
COG category[R] General function prediction only 
COG ID[COG0488] ATPase components of ABC transporters with duplicated ATPase domains 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATTCGCC TCGACAAGAT CGGCAAGCAG AACGGTCGCC AGATCGTCTT CATCGAGGCG 
TCGGCCGCCC TGCAGAAGGG CGAGAAGGCC GGCCTTGTCG GCCCGAACGG CGCCGGCAAG
ACCACGCTCT TCCGCCTGCT CACTGGCCAG GAACAGCCGG ACGAGGGACA GGTCTCGTCG
GAGCGCGGCG TCACCATCGG CTATTTCAGC CAGGATGTCG GCGAGATGGC CGGCCGCTCC
GTGGTCGCCG AGGTGATGGA CGGCGCCGGC CCGGTCAGTT CCGTGGCGGC CGAACTCAAG
GAGCTCGAGG CGGGATTGGC CGATCCCGAC CGAGCCGACG AGATGGATGC CCTGGTCGAA
CGCTACGGCG AGGTGCAGGC CCGCTTCGAG GAACTCGACG GCTACGCGCT CGAGGGCCGC
GCCTACGAGG TTCTGGCCGG CCTCGGCTTC TCCCAGGAGA TGATGGACGG GGATGTCGGC
CGCCTTTCGG GCGGCTGGAA GATGCGCGTG GCGCTCGCCC GCATCCTCCT GATGCGCCCC
GACGTGATGC TGCTCGACGA GCCGAGCAAC CACCTCGACC TGGAGAGCCT GATCTGGCTC
GAATCCTTCC TCAAGGGCTA TGACGGCGCA CTGATGATGA CCTCGCACGA CCGCGAGTTC
ATGAACCGCA TCGTCTCCAA GGTGATCGAG ATCGACGGCG GCACCCTCAC CACCTATTCC
GGCGATTACG CCTTCTACGA GCAGCAGCGC GCGCTGAACG AGGCGCACCA GCAGGCGCAG
TTCGAGCGCC AGCAGGCGAT GCTCGCCAAG GAGATCAAGT TCATCGAGCG GTTCAAGGCG
CGGGCCAGCC ACGCCGCCCA GGTCCAGAGC CGGGTGAAGA AGCTCGACAA GATCGAGCGG
GTCGAGCCGC CGCGCCGCCG CCAGACCGTC GCCTTCGAGT TCCAGCCGGC GCCGCGCTCG
GGCGACGACG TCGCGATGCT GAAGGGCGTA CACAAGCGCT ACGGCAGCCG GATCATCTAC
GAGGGGCTCG ACTTCTCGAT CCGCCGCAAG GAGCGCTGGT GCGTGATGGG CGTCAACGGC
GCCGGAAAGT CGACCTTGCT GAAACTCATT ACCGGCACGG CACAGCCCGA TACCGGGACG
GTGACTGTCG GCGGCAGCGT CAAGCTCGGC TACTTCGCCC AGCACGCCAT GGATCTGCTC
GACGGCGACC TCACCGTGTT CGAGGATCTG GAGAGCAGCT TTCCCCAGGC CGGCCAGGGC
TCGCTGCGGG CGCTCGCCGG CTGCTTCGGC TTCTCCGGCG ACGACGTCGA GAAGCCGTGC
CGGGTGCTGT CGGGCGGCGA GAAGGCGCGG TTGGTGATGG CCAAGATGCT CTACGACCCG
CCGAACTTCC TCGTCCTCGA CGAGCCGACC AACCACCTCG ACATCGCCAC CAAGGAAATG
CTGATCAACG CGCTGGCGGG CTTCGAGGGA ACGATGCTCT TCGTCAGCCA CGACCGGCAC
TTCCTCGCCG CGCTGTCGAA CCGGGTGCTC GAAGTGACCG GTGACGGAAT CCGGCAGTAC
GGCGGCGGCT ACTCGGAATA CGTGGCGAGC ACCGGCCAGG AAGCCCCGGG TCTGCGCAGC
TGA
 
Protein sequence
MIRLDKIGKQ NGRQIVFIEA SAALQKGEKA GLVGPNGAGK TTLFRLLTGQ EQPDEGQVSS 
ERGVTIGYFS QDVGEMAGRS VVAEVMDGAG PVSSVAAELK ELEAGLADPD RADEMDALVE
RYGEVQARFE ELDGYALEGR AYEVLAGLGF SQEMMDGDVG RLSGGWKMRV ALARILLMRP
DVMLLDEPSN HLDLESLIWL ESFLKGYDGA LMMTSHDREF MNRIVSKVIE IDGGTLTTYS
GDYAFYEQQR ALNEAHQQAQ FERQQAMLAK EIKFIERFKA RASHAAQVQS RVKKLDKIER
VEPPRRRQTV AFEFQPAPRS GDDVAMLKGV HKRYGSRIIY EGLDFSIRRK ERWCVMGVNG
AGKSTLLKLI TGTAQPDTGT VTVGGSVKLG YFAQHAMDLL DGDLTVFEDL ESSFPQAGQG
SLRALAGCFG FSGDDVEKPC RVLSGGEKAR LVMAKMLYDP PNFLVLDEPT NHLDIATKEM
LINALAGFEG TMLFVSHDRH FLAALSNRVL EVTGDGIRQY GGGYSEYVAS TGQEAPGLRS