| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mpop_0161 |
|---|
| Symbol | |
|---|
| ID | 6311748 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylobacterium populi BJ001 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010725 |
|---|
| Strand | - |
|---|
| Start bp | 171748 |
|---|
| End bp | 172749 |
|---|
| Gene Length | 1002 bp |
|---|
| Protein Length | 333 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 642648870 |
|---|
| Product | short-chain dehydrogenase/reductase SDR |
|---|
| Protein accession | YP_001922887 |
|---|
| Protein GI | 188579442 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0300] Short-chain dehydrogenases of various substrate specificities |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 7 |
|---|
| Plasmid unclonability p-value | 0.264514 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 31 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCGCATA AGGCGCTGCG CGAGCAGGTC ATCGTCGTCA CAGGCGCGTC GAGCGGCATC
GGCTTGGCCA CCGCCCACAT GGCCGCCAAG CGCGGCGCCC GGGTGGTGCT CGCCGCGCGC
AGCCAGGACG TGCTCGCCCG GGTCGCCGAC GAGCTCGGCC CGAACGCAAC CTATGTCGTC
GCCGACGTAG GCCGGCGCGA GGACGTCCAG GCCATCGCCG ACAAAGCAAT CGCGACGTTC
GGCGGCTTCG ACACCTGGGT CAACGTCGCC GGCCTGACCG TCTACGGGCC GTTGCGCGAG
ATCGCCTACA AGGATCACGA GCGCCTGATC CAGACCAACC TCTGGGGTAC GGTGAATGGC
TCTCTGATGG CCGTCGAGCA CCTGCGGAAA CGCGGTGGCG CGCTGATCAA TGTCGGCAGT
ATCGCATCCG ACCTCGCCTT CCCGTTTCAG GGCCTTTACG CGACCTCGAA GCACGCGGTG
AAGGGTTTCA CCGACACCTT GCGCATGGAG CTCATCGCGG ACCGGGCGCC GGTCTCGGTC
ACCCTCGTGA AGCCGGCGTC CATCGACACG CCGCTGCCGC AGCGTGCCCG CAACTACATG
GACCGCGAGC CGACGCTGCC GCCGCCGATC TACCCGCCCG AGGAGGTGGC CAACGCCATC
CTGCACGCCG CCGTGCACCC GCAGCGGGAC ATCTTCGTGG GCGGCGGCGG CAAGATGTTC
GTGATGGGCA AGGAGTTCGC GCCGGGCGCC TACGACGAGC TGGCGCCGGC CATCATCGCC
TTGCAAAAGC GTGCCGAGGA GCCGCGGGAC CCGCAGGGCG CCCTCCATGC GCCGCGGCAT
GCCGGCGAGG TTCGCGGCGA CCCGCCCGTC TACGTCGTGC GCACCAGCGC CTACACTCGG
GCGACCTTGC ACCCGCTGGC GACCGCCAGC GTGGTCGCCG CCGGCCTGGC CGCGACGGCC
GCCGTGATCT TCGGCACGCG ACCCAGGCAG CGCCGTCGCT GA
|
|---|
| Protein sequence | MAHKALREQV IVVTGASSGI GLATAHMAAK RGARVVLAAR SQDVLARVAD ELGPNATYVV
ADVGRREDVQ AIADKAIATF GGFDTWVNVA GLTVYGPLRE IAYKDHERLI QTNLWGTVNG
SLMAVEHLRK RGGALINVGS IASDLAFPFQ GLYATSKHAV KGFTDTLRME LIADRAPVSV
TLVKPASIDT PLPQRARNYM DREPTLPPPI YPPEEVANAI LHAAVHPQRD IFVGGGGKMF
VMGKEFAPGA YDELAPAIIA LQKRAEEPRD PQGALHAPRH AGEVRGDPPV YVVRTSAYTR
ATLHPLATAS VVAAGLAATA AVIFGTRPRQ RRR
|
|---|
| |