Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mpop_0134 |
Symbol | |
ID | 6311243 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methylobacterium populi BJ001 |
Kingdom | Bacteria |
Replicon accession | NC_010725 |
Strand | - |
Start bp | 134596 |
End bp | 136644 |
Gene Length | 2049 bp |
Protein Length | 682 aa |
Translation table | 11 |
GC content | 73% |
IMG OID | 642648844 |
Product | PAS/PAC sensor hybrid histidine kinase |
Protein accession | YP_001922861 |
Protein GI | 188579416 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG0642] Signal transduction histidine kinase [COG0784] FOG: CheY-like receiver |
TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.574481 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 0.0374693 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGAGCGTTT CCATCGCGGA CGAGGAGCGC GTCCTCATCC TCGCGCCGCG CGGACGCGAC GCCGCCGTCA CGGGGCAGGT GCTCGCCCAG GCGGGCACGG GGACCGAGCC GTGCCCGGAC ATGGCGGCGT TGCTGGACGG GTTGGCTGCC GGCGCCGGCG CGGCGCTCGT CACCGAGGAG GCGCTGGACG GCGACCTGGA TGCCCTGTTC GCTTGGCTGG ACGCTCAGCC GGCGTGGTCG GACTTCCCCT TCATCGTGCT GGCGACGCGC CAGGCCGGGC GCCGCCCGGA GCGCGCCGCG CGCCTGCTCG CACGGCTCGG CAACGTCGTC CTGCTGGAGC GCCCGGTGAA CGCCGAGACG CTGGCGAGCG CCGCGGCCTC GGCCCTGCGG GCGCGCCGCC GCCAGTACCA GGCCCGCGAG TACCTCCTGG AACGCGAGCG CGCCCAGGAG CAGCTCCGAC GCTCCAACGA GGACCTGGAG CGGCGCGTGG CCGAGCGGAC GCGCGAGGTC GAGGCCGCTC ACGAGACCCT GGCCTTCGCG CTCGACGCCG CCGGCATGGC CTCGTGGGAC CTCGACTACG TCACCGGAGT TTCGCGTCGC TCGCCGCGCT ACGACGCCGT CTTCGGCTAC GCGGGTGAAG GGCCCGCCTG GGACCGGCAG GTCCTCCTCG ACCACATCGT CGAGGAGGAC CGCGGCATCG CCGAGCGCGC TTTCGCGGCG ACCTTGGAGA CCAACGCGCT CGACCTCGAA TGCCGCGTCC GGCGCGTCGA CGGGGCCATC CGGTGGATCG CCCTGCAGGG CCGGATCAAG CGCGACGCCT CCGGCGCGCC CTTGCGCATC GCCGGCATCC TGATGGATCG GAGCGACCAG CGGCTCACCG AGGAGGCGCT GCGCCAGGCC CAGAAGATGG AGGCCATCGG TCAGTTGACC GGCGGCGTGG CGCACGACTT CAACAACCTG CTCACCGTCA TCGTCGGCGG CCTCGACATG ATGCTGCGCC GGCCCGAGCA GGTCGACCGC GTCAAGCGCC TGGCCGAGGC GGCCATGGGG GCGGCCCGTC GCGGCGAGCA GCTGACCCAG CAGCTCCTGG CCTTCTCGCG CCGGCAGATG CTGCGGCCCC AGACCCTCAA CCCGAACCGG CTGCTGCTCG ACTTCAAGCC GCTGGCCGAG CGCGCGGCGG GCGGGGCCGT CGAGCTCGCC TTCGACCTCG ACCCGGCCCT CGATCCGATC CGCATCGACC CGGCGCAGTT CGAGGCGGCG GTGCTGAACC TGATCGTGAA CGCGCGCGAC GCGATGGAGG GGCGGGACGG GCACGCCCGC ATCGCAATGA CGAGCCGCAA CGCCCGCCTC GACACGGCGG CCGTCGCCGA CAGGGGCGTG CCGCCCGGGC CCTACATCGT GGTCTCGGTG ACCGACACCG GGAGCGGCAT CCCGCCCGAC AAGCTCCAGC GCGTGTTCGA GCCGTTCTTC ACCACCAAGG AAGTGGGCAA GGGCACCGGG CTCGGATTGA GCCAGGTCTA CGGCTTCACG CGCAGCGCCG GAGGGTTCGC TCACATCGAT TCCGTGGTCG GTGCAGGCAC GACGGTGAGC CTGTACTTCC CGCGCTCGGC CGACCCTGCG GGCGAGGAGG TCGGCACGGG CCCGGCCGCG GCCATCCCGT TGCGCCGCGC CGGCGAGGGC GAGACGGTGC TGCTGGTCGA GGACGACGAG CAGGTGCTCG CCATGGCGAC CGAGAGCCTG GAGGAACTGC GCTACCGGGT CGTCGCCCGC AACGCCGCCG AGGCGCTGGG GCACCTCACG GGTGTGGAGC GTATCGACAT CCTGTTCTCG GACGTGGTGA TGCCCGGCGG CATGAACGGG TCGCAGCTCG CGGTCGAGGC GCAGCGGCTC CGGCCCGGCG TCAAGGTGCT GCTCACCTCG GGCTACGTGG CCAACCTCGA CGAGGGGCAG GTCATCGGGC GCGGCGAGCT CCCGGTGCTC AACAAGCCCT ACCGCCGCGA CGAGCTCGCT CGCTCGCTGC GGCTGGTGCT CGGGGGTGGG GAGCGCTGA
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Protein sequence | MSVSIADEER VLILAPRGRD AAVTGQVLAQ AGTGTEPCPD MAALLDGLAA GAGAALVTEE ALDGDLDALF AWLDAQPAWS DFPFIVLATR QAGRRPERAA RLLARLGNVV LLERPVNAET LASAAASALR ARRRQYQARE YLLERERAQE QLRRSNEDLE RRVAERTREV EAAHETLAFA LDAAGMASWD LDYVTGVSRR SPRYDAVFGY AGEGPAWDRQ VLLDHIVEED RGIAERAFAA TLETNALDLE CRVRRVDGAI RWIALQGRIK RDASGAPLRI AGILMDRSDQ RLTEEALRQA QKMEAIGQLT GGVAHDFNNL LTVIVGGLDM MLRRPEQVDR VKRLAEAAMG AARRGEQLTQ QLLAFSRRQM LRPQTLNPNR LLLDFKPLAE RAAGGAVELA FDLDPALDPI RIDPAQFEAA VLNLIVNARD AMEGRDGHAR IAMTSRNARL DTAAVADRGV PPGPYIVVSV TDTGSGIPPD KLQRVFEPFF TTKEVGKGTG LGLSQVYGFT RSAGGFAHID SVVGAGTTVS LYFPRSADPA GEEVGTGPAA AIPLRRAGEG ETVLLVEDDE QVLAMATESL EELRYRVVAR NAAEALGHLT GVERIDILFS DVVMPGGMNG SQLAVEAQRL RPGVKVLLTS GYVANLDEGQ VIGRGELPVL NKPYRRDELA RSLRLVLGGG ER
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