Gene Mpop_0115 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMpop_0115 
Symbol 
ID6310660 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium populi BJ001 
KingdomBacteria 
Replicon accessionNC_010725 
Strand
Start bp120214 
End bp121125 
Gene Length912 bp 
Protein Length303 aa 
Translation table11 
GC content70% 
IMG OID642648825 
Productbeta-lactamase domain protein 
Protein accessionYP_001922842 
Protein GI188579397 
COG category[R] General function prediction only 
COG ID[COG0491] Zn-dependent hydrolases, including glyoxylases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value0.298027 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCGACC AGACCATCCC GTCGTTGCGC GGTCGACCCA TCGTGACCGG CTTCCACGAC 
GAGACGACCG GCAGCATCCA GTACGTCGTC GCCGATCCCG AGACGAAGCG CTGCGCCATT
ATCGACCCGG TGCTCGACTT CGACCCGAAG TCCGGGGCGA CCGCCACCCG CTCCGCCGAC
GCCCTGCTCG CCCATATCAA GCGCGAGGGC TACGAGTTGG AGTGGATCCT CGACACCCAC
CCGCACGCCG ACCACTTCTC GGCCGCCGGC TACCTGCACG ACAAGACCGG CATCCCGACC
GCCATCGGCG AGAAGGTCGT CAAAGTTCAG CGGCTCTGGA AGGGGCTCTA CAACCTGCCC
GAAACGTTCC GGACGGACGG CTCGCAGTGG GACCGGCTCT TCGCCGACGG CGAGCGCTTC
CGGATCGGCA ACCTCGACGT CGAGGTGATG TTCACGCCGG GCCACACCCT GGCCTCCATC
GCCTACCGGG TGGGCGACGC CGCCTTCATC CACGACACCC TGTTCATGCC CGACAGCGGG
TCGGCGCGGG CCGACTTCCC GGGCGGCGAC GCGCACGCGC TCTGGCGCAG CATCCAGCGC
GTCATGGCGC TGCCGGACGG GACGCGGCTG TTCACCGGGC ACGATTACCG TCCGGACGGG
CGCGAGGCGG CCTGGGAGAG TACGGTCGCC CGGCAGCGGG CCGAGAACCC GCACCTCGTC
GAGACCCCAA GCGAGGAGGC GTTCGTCCGC ATGCGTGAGG CCCGCGACCG CGAACTGCCG
ATGCCCAAGC TTATCCTGCA TTCCCTGCAG GTAAACATCC GTGGCGGCCG CCTGCCCGAG
CCCGAGGCGA ACGGCAGGCG TTACCTGAAG ATCCCGCTGG ACGCCCTCGA CGGCGCGGCC
TGGGGCGCGT GA
 
Protein sequence
MSDQTIPSLR GRPIVTGFHD ETTGSIQYVV ADPETKRCAI IDPVLDFDPK SGATATRSAD 
ALLAHIKREG YELEWILDTH PHADHFSAAG YLHDKTGIPT AIGEKVVKVQ RLWKGLYNLP
ETFRTDGSQW DRLFADGERF RIGNLDVEVM FTPGHTLASI AYRVGDAAFI HDTLFMPDSG
SARADFPGGD AHALWRSIQR VMALPDGTRL FTGHDYRPDG REAAWESTVA RQRAENPHLV
ETPSEEAFVR MREARDRELP MPKLILHSLQ VNIRGGRLPE PEANGRRYLK IPLDALDGAA
WGA