Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mpop_0110 |
Symbol | |
ID | 6310843 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methylobacterium populi BJ001 |
Kingdom | Bacteria |
Replicon accession | NC_010725 |
Strand | - |
Start bp | 113918 |
End bp | 117067 |
Gene Length | 3150 bp |
Protein Length | 1049 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 642648820 |
Product | heavy metal efflux pump, CzcA family |
Protein accession | YP_001922837 |
Protein GI | 188579392 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG3696] Putative silver efflux pump |
TIGRFAM ID | [TIGR00914] heavy metal efflux pump (cobalt-zinc-cadmium) |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 26 |
Fosmid unclonability p-value | 0.705785 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTTCACCT TCCTCGTCAG CCAGTCGGTC CGCAACCGCC TGCTCGTCCT CGCCATGGCC ACGGTGCTGG TGCTCTTCGG CGCCTTCACC GCGACCAAGC TCCCGGTCGA CGTCTTCCCC GACCTCAACA AGCCCACCGT CACCATCATG ACGGAGGCGG AAGGGTACGC GCCCCAGGAG GTCGAGCAGC TCGTTACCTA TCCCATCGAG ACCCGGATGA ACGGGCTGCC GGGCGTGACC CGGGTGCGCT CGGTCTCGGG CGTGGGTCTG TCCATCACCT ACGTCGAGTT CGACTGGGGC ACCGACATCT ACCGCAACCG CCAGCAGGTC GCCGAGCGGC TCGCCCTGGT GCAGGACCAG CTGCCCCGGG GCGTGACCCC GGTGATGGGC CCCATCTCTT CCATCATGGG GCAGATCCTG CTGGTGGCGG TGACCGGCGA GACCGCGAGC CCGATGCAGG TGCGCGAGGT CGCCGACTTC ACCATCCGGC CGCGGCTCCT CACCATCCCG GGCGTGGCGC AGGTCATCCC CATCGGCGGC GAGGTGCGCC AGTTCCGGGT CAGCCCGAAC CCGGCCGCCA TGCGCTCGCT CGGGGTGACG AACGCCGGGC TTGAGACGGC GCTCGCGCAG TTCGGCACCA ACGCCGGCGG CGGCTTCACC GACCAGCATT CCCGCGAGTA CCTGATCCGG AACATCGGCC GGACCATGAG CCTCGACGAT CTGCGCAACC TCGTGGTCGC GACGGTCGCC GACACCCCGG TCCACCTGCG CCAGGTCGCG GAGGTGTCCT TCGCCGCACG GACGAAGCGG GGCGACGCCG GCTACATGGC CAAGCCCTCG GTCATTGTCT CGGTCGAGAA GCAGCCCGAC GTCGACACGG TGCGGCTGAC CCGCAGCATC GAGACCGCCC TGAAGGAGAT GTCGTCGACG CTGCCGGCCG GCATCAGGGC CGACCATGTC CTGTTCCGGC AGGCCGACTT CATCGAGACC TCGATCCGCA ACGTCGAGCG CGTCCTCGTC GAGGCCGTGC TGGTGGTGGC GGTGGTGCTG TTCGCGTTCC TCCTGAACGT GCGCACCACG GCCATCTCGC TGCTCGCCAT CCCGGTCTCG GTGCTGACGA CCGCGGTGGT GTTTTACCTG TTCGGGCTGT CCATCAACAC GATGACCCTC GGCGGCCTCG CCATCGCCAT CGGCGAGCTC GTCGACGACG CGGTCGTGGA CGTCGAGAAC ATCTACCGGC GGCTCGGCGA GAACCGGCGG GCGGGCAACC CGAAGAGCGT GTTCCAGGTG GTGGTCGAGG CCTCGAACGA GGTCCGCTCC GGCATCGTCT ACGCGACGCT CATCATCATC CTGGTGTTCG TGCCGCTGTT CGCCCTCTCC GGCATCGAGG GCCGGCTCTT CGCCCCGCTG GGGCAGGCCT ACATCATCTC GATCCTGGCG AGCCTGCTCA CCTCCATCAC CCTGACCCCG GTGCTGGCCT CGCTCCTGCT GCCGGGCTTG AAGAACCTGG AGGAGCACGA CAGCCGCTTC CTCAAGCTGC TCAAGCGCGG CAACGCCGCC CTCCTGCAGG TCGCCTTCCG CCACAAGGGC CTGCTCGTCG GCACCGTCGC GGCGGCGGTG GTGGCCGCGG GCGTGGCCGC CTGGAACCTG CCCCGGGCCT TCCTGCCGCC GTTCAACGAG GGCTCGTTCA CGGTCAACAT GACCTTCAAC CCGGGGATCT CGCTCGCCGA GAGCAACCGG GTCGGGCTGA TCGCCGAGAA GCTGCTCTTG GACATCCCAG GCGTGAAGGC GGTCGGCCGC CGGACCGGCC GGGCTGAGCT CGACGAGCAC GCCGAGGGTG TCCACTCCTC TGAGATCGAG GTGGCGCTGG ACGAGGGCGC CAAGCGTCCG AAGGAGGCCC TCGTCGCCGA CATGCGCGGG CGCCTCGCGG CGCTGCCGGT GGCGGTCAAC GTCGGCCAGC CCATCTCGCA CCGGCTTGAC CACATGCTCT CGGGCGTGCG GGCCGAGATC GCGCTCAAGG TGTTCGGCGA GGACCTCGAC GCCCTGCGCC GGGTCGCCAA CTCCCTGCGC GACCGGATGG CCACGATTCC GGGTCTCGTC GACCTGCAGG TCGAGCGGCA GGTGCGCATC CCGCAGCTTG AGGTGCGGGT CGACTACACC CGGGCGGCCC TCTACGGGGT CCAGCCGGCC GCGGTGGTCG AGCAGATCAG CCGCCTCTCG AACGGCAGGG TGGTCTCCAC CGTGGTCGAC GGCGTGCGCC GCTTCGACGT GGTCCTGCGC CTGTCGGAGA ACCGCCGGAC CACCGCCGGA CTGGGCGACC TGCTGCTGGA GACGCCCTCT GGCTGGGTGC CGGCGCGGCA GGTCGCCGAC ATCCGCGAGA CCGACGGGCC GAACCAGATC CTGCGCGAGA ACGCCCGCCG CCGCATCGTC GTCCAGGCCA ACACCAACGG CGAGAGCGAC ATGGCTACCA TCGTGGCGGC CATCCGCGAG GCAGTGGCGA AGGAGCCGCT CCCGCCCGGC TTCTTCACCA GCCTGGAGGG CACCTTCCAG GCGCAGGAGG AGGCGAGCCG GACCATCGGG GTACTCTCGG CGCTGTCCCT GGCCCTGGTC TTCGCCATCC TGTTCAGCCG CTACCGCTCG GCCGCGCTCG CGCTCATCAT CATGGGCAAC GTGCCGCTGG CGCTGATCGG CTCGGTGGCG GCCCTGTGGC TCGTCGGGCA GCCGCTGTCC GTGGCGTCGA TGATCGGCTT CATCACGCTG ACCGGCATCG CCGCGCGCAA CGGCATCCTG AAGATCAGCC ACTACCTGAA CCTGTCGCTG AACGAGGGGG TGCCGTTCGG CCCCGACCTC GTGGTGCGCG GCAGCCTGGA GCGGCTGACC CCAGTCCTGA TGACGGCCCT TTCGGCCGGC GTGGCGCTGG TGCCGCTGCT CTACGATGCC GCGAGCCCGG GCAAGGAGAT CCTGCACCCG GTCGCGGTGA CGATCTTCGG CGGGCTGATC AGCGCGACGC TGCTCGACAC CTTCCTGACC CCCGTCCTGT TCCTGCGCTT CGGCGCCAGG CCGCTGGAGC GGCTGCGCGC CGTCCACGCC GAGGCGCCGG CCAACCCATC CCCGGACGGA GCGCGCCCGC GCCTGGCCGA GGCCTACTGA
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Protein sequence | MFTFLVSQSV RNRLLVLAMA TVLVLFGAFT ATKLPVDVFP DLNKPTVTIM TEAEGYAPQE VEQLVTYPIE TRMNGLPGVT RVRSVSGVGL SITYVEFDWG TDIYRNRQQV AERLALVQDQ LPRGVTPVMG PISSIMGQIL LVAVTGETAS PMQVREVADF TIRPRLLTIP GVAQVIPIGG EVRQFRVSPN PAAMRSLGVT NAGLETALAQ FGTNAGGGFT DQHSREYLIR NIGRTMSLDD LRNLVVATVA DTPVHLRQVA EVSFAARTKR GDAGYMAKPS VIVSVEKQPD VDTVRLTRSI ETALKEMSST LPAGIRADHV LFRQADFIET SIRNVERVLV EAVLVVAVVL FAFLLNVRTT AISLLAIPVS VLTTAVVFYL FGLSINTMTL GGLAIAIGEL VDDAVVDVEN IYRRLGENRR AGNPKSVFQV VVEASNEVRS GIVYATLIII LVFVPLFALS GIEGRLFAPL GQAYIISILA SLLTSITLTP VLASLLLPGL KNLEEHDSRF LKLLKRGNAA LLQVAFRHKG LLVGTVAAAV VAAGVAAWNL PRAFLPPFNE GSFTVNMTFN PGISLAESNR VGLIAEKLLL DIPGVKAVGR RTGRAELDEH AEGVHSSEIE VALDEGAKRP KEALVADMRG RLAALPVAVN VGQPISHRLD HMLSGVRAEI ALKVFGEDLD ALRRVANSLR DRMATIPGLV DLQVERQVRI PQLEVRVDYT RAALYGVQPA AVVEQISRLS NGRVVSTVVD GVRRFDVVLR LSENRRTTAG LGDLLLETPS GWVPARQVAD IRETDGPNQI LRENARRRIV VQANTNGESD MATIVAAIRE AVAKEPLPPG FFTSLEGTFQ AQEEASRTIG VLSALSLALV FAILFSRYRS AALALIIMGN VPLALIGSVA ALWLVGQPLS VASMIGFITL TGIAARNGIL KISHYLNLSL NEGVPFGPDL VVRGSLERLT PVLMTALSAG VALVPLLYDA ASPGKEILHP VAVTIFGGLI SATLLDTFLT PVLFLRFGAR PLERLRAVHA EAPANPSPDG ARPRLAEAY
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