Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mpop_0052 |
Symbol | |
ID | 6310742 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methylobacterium populi BJ001 |
Kingdom | Bacteria |
Replicon accession | NC_010725 |
Strand | + |
Start bp | 55736 |
End bp | 56659 |
Gene Length | 924 bp |
Protein Length | 307 aa |
Translation table | 11 |
GC content | 76% |
IMG OID | 642648765 |
Product | acyl transferase domain protein |
Protein accession | YP_001922783 |
Protein GI | 188579338 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG0331] (acyl-carrier-protein) S-malonyltransferase |
TIGRFAM ID | [TIGR03131] malonate decarboxylase, epsilon subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.399872 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 0.113572 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGACGCTGG CGGTCCTCCT GTCCGGCCAG GGCGGCCAGC ATCCGGGCAT GTTCGACCTC ACGGCCGAGA GGCCGGCGGC CGCACCGGTC TTCGCGGCGG CCGAGCGCAT CCTCGGCCGC GACCCGCGCG ACCTCGTGCG CGAGCCGGGG GCGGACCTGC ACGGCAACCG CACCGGGCAG ATCCTCTGCT GCGTCGCGGC GCTTGCCGGC TGGACCATTG TTGAGGCGGC GGGCGCCGTC CGCACCGTCG TCGCCGGCTA CAGCATCGGC GACCTCGCCG CCTGGGGCTG CGCCGGCCGC TTCGACGCGG CGGCGATCCT GCGCCTAGCC GCCGCCCGCG CCGAGGCCAT GGACGCGGCC GCGGGCGATG GTGCCGGGCT CGCCGGCATC CGCGGGATCC GCCTCGCGGA GATCGAGGCC ATCGCCGGGC GTTACGGCGC CCATCTCGCG ATCCGCAACG CCGACGACAG CGCCGTTGTC GGCGGCCCGC GCCCGGCGCT GGAGGACATC TGCGCGGCCG CCCGCGCGGC CGGCGCGCAA CGGGCCGTGA TCCTGTCGGT GCGGACGCCC TCGCACACGC CGCTCCTGCG CGAAGCGAGC CGGCACTTCG CCGACGCGCT CGCCGCCGAG CACCCGCAGC GCCCTCCCCG CGGGGCAGCG CGGCTCCTCA GCGGGCTCGA CGGCGCGCCC GTCTTCGATG CCGGGGCCGG CCTCTCGAAG CTCGCGGATC AGATCTCGCA GACCATCGAC TGGGCCGCCT GCCTGACCGC CTGCCGGGAG TATGGCTGCG ACACCGTGCT GGAACTCGGC CCCGGTCACG CCCTCGCCAC CATGGCCCGG AGCGCCCTCC CCGGCGCGCG GGTCCATGCG CTCGAAGAGT TCCGCTCTGC CATCGGCGTC GCGCAATGGA TCGGCGCCAC CTGA
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Protein sequence | MTLAVLLSGQ GGQHPGMFDL TAERPAAAPV FAAAERILGR DPRDLVREPG ADLHGNRTGQ ILCCVAALAG WTIVEAAGAV RTVVAGYSIG DLAAWGCAGR FDAAAILRLA AARAEAMDAA AGDGAGLAGI RGIRLAEIEA IAGRYGAHLA IRNADDSAVV GGPRPALEDI CAAARAAGAQ RAVILSVRTP SHTPLLREAS RHFADALAAE HPQRPPRGAA RLLSGLDGAP VFDAGAGLSK LADQISQTID WAACLTACRE YGCDTVLELG PGHALATMAR SALPGARVHA LEEFRSAIGV AQWIGAT
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