Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mpop_0038 |
Symbol | |
ID | 6311133 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methylobacterium populi BJ001 |
Kingdom | Bacteria |
Replicon accession | NC_010725 |
Strand | - |
Start bp | 39279 |
End bp | 41324 |
Gene Length | 2046 bp |
Protein Length | 681 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 642648751 |
Product | PAS/PAC sensor hybrid histidine kinase |
Protein accession | YP_001922769 |
Protein GI | 188579324 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG0642] Signal transduction histidine kinase [COG0784] FOG: CheY-like receiver |
TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 0.0323591 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCGTCGC CCGAGGAGCG GGTTCTGATC CTGGCTCCCC GCGGACGCGA CGCCGCGGTG ATCGAGCAGG TGCTGGACCG CGCCGGGCTC GCCGCCGCCG TCTGTGCGGA TGTCACGGAA TGGGTGTCTT GCCTCCGGGC CGGCGCCGGG TCCGCGATCG TCACCGAGGA GGCCCTGGCC GACAGCGACA TGCAGGCCCT CTCGGGTTGG CTCGACGCGC AACCACCCTG GTCGGACTTT CCCTTCATCG TTCTGGCGAC TCGTCAGGCC GGTCCGCGCA CCCAACGCGC GGCGGATTCG CTGAAGCGAC TCGGCAACGT GGTCCTGCTG GAGCGTCCGA TCAATGCGGA GACGCTGACC AGCGCCGTCG TCTCGTCGCT GCGCGCGCGC CGCCGGCAGT ACCAGGCCCG GGAACACCTA CTGGAGCGGG AGCGGGCTCA GGATCAGCTT CGGCGGGCCA ACGAGGAACT GGAGCGGCGC GTGGCCGAAC GGACGCGCGA GGTCGAGGCC GCCCACGAAA CCCTGGCCTT CGCCCTCGAC GCGGCTGGCA TGAGTTCGTG GGACATCGAT ACGGAAACCG GCATCCACCG CCGCTCGCCA GGCTTCGACG CCGTGTTCGG CTACGAGGGC AGCGGGCGTG CCTGGGATCG CGAGTCGTTC CTCGATCACG TCGTCGAGGA GGATCGCGAC ACCGTCGCGG AGGCGTTCGC GAGCGTGGCT GAGACGAGCA AGCTCGACTG CGAATGCCGC ATCCGGCGCG TGGACGGAGC GATCCGCTGG ATCGCCATGC GCGGGCAGGT CAAGCGAGAT ACCGACGGCC GGCCGCTGCG CATCGCCGGC ATCCTGATGG ACCGCACGGA GCAGCACATC ACCGAGGAGG CCCTGCGCCA AGCGCAGAAG ATGGAGGCGA TCGGCCAGCT CACCGGCGGC GTGGCCCACG ATTTCAACAA CCTGCTCACC GTCATCGTCG GCGGCCTCGA CATGATGCTG CGCCGCCCCG AGCAGACCGA CCGGGTGAAG CGGTTGGCTG AGGCGGCGAT GGGAGCGGCA CGCCGCGGCG AGCAGCTCAC TCAGCAGCTC CTCGCCTTCT CGCGCCGCCA GATGCTGCGG CCGCAGACGC TCAACCCGAA CCGCCTGCTC TTGGACTTCC GCCCGCTCGC CGAGCGTGCG GCGACGGGGG CCGTCGAACT GACCTTCGAT CTCGATCCGG CGCTGGACCC GATTCGCATC GACCCGGCGC AGTTCGAATC GGCTGTGCTG AACCTGATCG TCAACGCGCG CGACGCTCTG GAAGGCAGCG ACGGGCCTGC GCGGATCGTG GTGACGAGCC GCAACGTCCG GCTCGGGACC GCCACGGTCG CCGACATGGG CGTGCCGCCG GGTCCCTACG TCGTCGTCTC GGTGGCCGAT ACCGGGAGCG GGATCCCGCC GGACAAGCTC CAGCGGGTCT TCGAGCCCTT CTTCACCACC AAGGAGGTCG GCAAGGGCAC CGGACTCGGG CTCAGCCAGG TCTACGGCTT CACCCGCAGT GCCAAGGGCT TCGCGCAGAT CGAATCGGAG GTCGGCAGGG GCACGACGGT GAGCCTGTAC TTCCCGCGCT CGACTGATCC GGCCGGCGAG GAGGTCGGGA CAGGGCCGGT CGGCGCCATC CCGCTGCGCC GGGCCGGCGA AGGCGAGACG GTGCTACTCG TCGAGGATGA CGAGCAGGTT CTCGGCATGG CCGTGGAGAG CCTGGAGGAA CTGCGCTACC GGGTCATCGT CACACGCAAC GCCGCGGAGG CGCTGGAGCA TCTGCACGGC GTCGAACGCA TCGACATCCT GTTCTCGGAT GTCGTCATGC CCGGCGGGAT GAACGGCTCG CAACTCGCCG TCGAGGCGCG GCGGGTGCGC CCGGACATCA AGATCCTGCT GACCTCGGGC TACGTAGCGA ATCTCGACGA GGGCCAGGTC CTCGGCCGCG GCGAACTTCC GGTGCTCAAC AAGCCCTATC GGCGCGACGA GCTGGCCCGC TCACTGCGGT TGGTACTCGG CGGCGAGAGG GTCTGA
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Protein sequence | MPSPEERVLI LAPRGRDAAV IEQVLDRAGL AAAVCADVTE WVSCLRAGAG SAIVTEEALA DSDMQALSGW LDAQPPWSDF PFIVLATRQA GPRTQRAADS LKRLGNVVLL ERPINAETLT SAVVSSLRAR RRQYQAREHL LERERAQDQL RRANEELERR VAERTREVEA AHETLAFALD AAGMSSWDID TETGIHRRSP GFDAVFGYEG SGRAWDRESF LDHVVEEDRD TVAEAFASVA ETSKLDCECR IRRVDGAIRW IAMRGQVKRD TDGRPLRIAG ILMDRTEQHI TEEALRQAQK MEAIGQLTGG VAHDFNNLLT VIVGGLDMML RRPEQTDRVK RLAEAAMGAA RRGEQLTQQL LAFSRRQMLR PQTLNPNRLL LDFRPLAERA ATGAVELTFD LDPALDPIRI DPAQFESAVL NLIVNARDAL EGSDGPARIV VTSRNVRLGT ATVADMGVPP GPYVVVSVAD TGSGIPPDKL QRVFEPFFTT KEVGKGTGLG LSQVYGFTRS AKGFAQIESE VGRGTTVSLY FPRSTDPAGE EVGTGPVGAI PLRRAGEGET VLLVEDDEQV LGMAVESLEE LRYRVIVTRN AAEALEHLHG VERIDILFSD VVMPGGMNGS QLAVEARRVR PDIKILLTSG YVANLDEGQV LGRGELPVLN KPYRRDELAR SLRLVLGGER V
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