Gene Mpop_0024 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMpop_0024 
Symbol 
ID6310151 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium populi BJ001 
KingdomBacteria 
Replicon accessionNC_010725 
Strand
Start bp26828 
End bp27916 
Gene Length1089 bp 
Protein Length362 aa 
Translation table11 
GC content67% 
IMG OID642648737 
Productcytochrome c oxidase, subunit II 
Protein accessionYP_001922755 
Protein GI188579310 
COG category[C] Energy production and conversion 
COG ID[COG1622] Heme/copper-type cytochrome/quinol oxidases, subunit 2 
TIGRFAM ID[TIGR02866] cytochrome c oxidase, subunit II 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value0.901821 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTCGATG CCCTCATCCC CGCCTTCCTG CGACCGGAAT CCGCCTCGGT TCAGGCGGCG 
AAGGTCGATG CGATCTTCAT CGGGCTGCTA CTGATTTCCT CGGCCATCGT CCTGCTGGTG
GTCGGGTTGG TGGTCACCTT CGCGATCCGG TTCCGCCGGG GCTCGTCGGC CAAGCGCGGC
GAGATGCCGA GCCTCGTCTC GCGCGAGTTC GAGATCGGCT GGACGGCGGC GACACTGTTC
ATCTTCCTTT TCATCTTCTG GTGGGCGGCC TCGATCGAGA TCGGCGCCTT CTCGGCCCCG
AAGGACGCCA TCGAGATCCA CGTCGTCGGC AAGCAGTGGA TGTGGAAGAC GCAAGGACCG
AGCGGCACGC GCGAGATCAA CGAGCTGCAC GTTCCCGTCG GTGCCCCGGT GCGCCTGCTC
CTGACCTCGC AGGACGTGAT CCACTCGTTC TACGTCCCGG CCTTCCGCCT GAAGCGCGAC
GCCCTGCCCT ATCAGCAGAC CGAAACGTGG TTCCAGGCCA CCAAGACCGG GACCTACCAC
CTGCTCTGCA CCGAATATTG CGGCACCGAC CATTCGCGCA TGCTCGGCCG GGTGATCGTG
ATGGAGCCGC AGGACTACGC GCAGTGGCTC ACCAAGCAGC CGGAGCGGGA CGGGCTCGCC
GAACTCGGCG AGCGGCTGTT CTCCGAGCGC GGCTGCTCCG GATGCCATAA TGCGGGCTCG
AAGGTGCACG CGCCTTCGCT CGCGGGCATC TGGGGCCAGT CGGTGCCGCT GGAGGGTGGG
CGCACGGCCA CCGTCGACGA GGCCTACATC CACGACTCGA TCCTCCAGCC GCAGCGCGAC
GTGGTGGCCG GCTACGAACC GATCATGCCG AGCTACGAGG GCAAGCTCTC CGACGGCGAG
ATCCAGGCGC TGACCGCCTA TATCCGCCAC GGCACCGACC GGTTCGACCT GATCGGCTCG
CTCAACCTCC CGCCCGCGCA GAACATCTGC GCACCCGGCG AGACGACGCA GGAGAGTGCG
CCGAACCAAT CCCTGCGCAG CCCCGCCATG GTGCCCGGCG CGCCCGCCTC GGGAGACACG
CCGCCATGA
 
Protein sequence
MLDALIPAFL RPESASVQAA KVDAIFIGLL LISSAIVLLV VGLVVTFAIR FRRGSSAKRG 
EMPSLVSREF EIGWTAATLF IFLFIFWWAA SIEIGAFSAP KDAIEIHVVG KQWMWKTQGP
SGTREINELH VPVGAPVRLL LTSQDVIHSF YVPAFRLKRD ALPYQQTETW FQATKTGTYH
LLCTEYCGTD HSRMLGRVIV MEPQDYAQWL TKQPERDGLA ELGERLFSER GCSGCHNAGS
KVHAPSLAGI WGQSVPLEGG RTATVDEAYI HDSILQPQRD VVAGYEPIMP SYEGKLSDGE
IQALTAYIRH GTDRFDLIGS LNLPPAQNIC APGETTQESA PNQSLRSPAM VPGAPASGDT
PP