Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mpe_B0420 |
Symbol | phnF |
ID | 4787560 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methylibium petroleiphilum PM1 |
Kingdom | Bacteria |
Replicon accession | NC_008826 |
Strand | + |
Start bp | 374691 |
End bp | 375407 |
Gene Length | 717 bp |
Protein Length | 238 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 640092852 |
Product | GntR family transcriptional regulator |
Protein accession | YP_001023430 |
Protein GI | 124262960 |
COG category | [K] Transcription |
COG ID | [COG2188] Transcriptional regulators |
TIGRFAM ID | [TIGR02325] phosphonates metabolism transcriptional regulator PhnF |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.330179 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 35 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | GTGATCCAAC GTGGCATCGG CGAGACCGTC TATCGACAAG TCCAGCGGCA GCTGGAAGCC GAGATCCGCT CGCTGCATCG CCCGGGCGAC GCCCTGCCGC CGGAGGCCGC CCTGGCCGAG CGTTTTGGCG TCAACCGGCA CACGCTGCGC CGCGCCCTTG AAGGGCTGAT CGCCGAAGGC TGGGTCGAGC GTCGCCACGG GTTGGGCAGC TTCGTGCTGC ACAAGCCGCT GGACTACGAC ATCGGCCAGC GTACCCGCTT CACGGAGACG CTCGAGGCCC AGGGTCGTGT CACCGAGAGC ACGGTGCTGC GCAAGCTGCG CATCCCGGCC CAGGGCGGCG TGGCCCAGCG CCTGCAACTC GACGAGGGCG AGCCGGTGGC CTGGATCGAG ACGCTGCGCA GCGTGGACGC GGCGCCGTTC TGCGTCATCT CGCACTACCT GCCGCTGACC CTGCTGCCGG GCGTGCTCGA CGACTACAGC GGCGGGTCAC TGCACGAATT CATCGAAGCA CAGCACGGCT GGCGCCTGAA GCGCACCGAG AGCCTGGTCT CGGGGGCGCT CCCGCAAGGC GATGACGCCA GCCTGTTGGC GATGCCGGCC CATGTGCCTG TACTTCGCGT CAAGAGCGTC AACGTGCGCG ACCGGGATGG AGCCCCGGTC GAGTACGCCC TGACTCGGTT CCGCGCAGAC CGCATGCAAC TGCGCATCAC CCCTTGA
|
Protein sequence | MIQRGIGETV YRQVQRQLEA EIRSLHRPGD ALPPEAALAE RFGVNRHTLR RALEGLIAEG WVERRHGLGS FVLHKPLDYD IGQRTRFTET LEAQGRVTES TVLRKLRIPA QGGVAQRLQL DEGEPVAWIE TLRSVDAAPF CVISHYLPLT LLPGVLDDYS GGSLHEFIEA QHGWRLKRTE SLVSGALPQG DDASLLAMPA HVPVLRVKSV NVRDRDGAPV EYALTRFRAD RMQLRITP
|
| |