Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mpe_B0365 |
Symbol | traE |
ID | 4787993 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methylibium petroleiphilum PM1 |
Kingdom | Bacteria |
Replicon accession | NC_008826 |
Strand | + |
Start bp | 315663 |
End bp | 316304 |
Gene Length | 642 bp |
Protein Length | 213 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 640092797 |
Product | sex pilus assembly protein |
Protein accession | YP_001023375 |
Protein GI | 124262905 |
COG category | |
COG ID | |
TIGRFAM ID | [TIGR02761] type IV conjugative transfer system protein TraE |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.0623018 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 32 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAACCTGA AGAACATGAC CAAGACCTGG CAGGCGGCGA ACAAGGTCGC CGCTCTGATG CTGGTTTCGA ACGTCGCTCT GGCGGCGGCG CTGCTCGTTT CGATCGTCGC CTTCTCCGGC AATCGTGAGC GCGTGGTGCT CGTGCCGCCG CACCTGGAGA AGCGCGTGTC GGTGGGCTGG AACACCGCGG ACGCGGAGTA CCTGAAGGGC TTCGGCACGT ACTTCGCGAT GCTGACCGCG AACGTCACGC CCAAGAGCGC TTCCTTCGTG GCGGACACGC TGTCGAGCGC GGTCTCGCCG GCGATCTACC CGGAGGTGCG TAAGCAGGTC CTGGTGCTGG CCAAGGATCC CGTGTTCCAG AAGTCCGGCG CGTCGGTCCG CTTCGACCCT ATCCAGGTGG AGTACGAGGC GGCCACCAAC AAGGTCTTCG TCGTGGGTGA GATCACGACG AACGACGCGA CGGGCCGAAT CAGCCGCGTC CAGAGCGTCT ACGAGATGGA GATCCGCATG GACAACGGCC GGCCTCAGGT CACCGCCATG GCTTCGTACG CCGGTGCCGA CCCGCACACG CTCCAGTGGA TCGAGAACAA CAAGGAGCGC CTGGCTGAAC AGCAGGCGCA GGCCGACGCA ACCAAGGAAT GA
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Protein sequence | MNLKNMTKTW QAANKVAALM LVSNVALAAA LLVSIVAFSG NRERVVLVPP HLEKRVSVGW NTADAEYLKG FGTYFAMLTA NVTPKSASFV ADTLSSAVSP AIYPEVRKQV LVLAKDPVFQ KSGASVRFDP IQVEYEAATN KVFVVGEITT NDATGRISRV QSVYEMEIRM DNGRPQVTAM ASYAGADPHT LQWIENNKER LAEQQAQADA TKE
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