| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mpe_B0241 |
|---|
| Symbol | rdgC |
|---|
| ID | 4787842 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylibium petroleiphilum PM1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008826 |
|---|
| Strand | - |
|---|
| Start bp | 206171 |
|---|
| End bp | 207169 |
|---|
| Gene Length | 999 bp |
|---|
| Protein Length | 332 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 640092646 |
|---|
| Product | recombination associated protein |
|---|
| Protein accession | YP_001023251 |
|---|
| Protein GI | 124262781 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG2974] DNA recombination-dependent growth factor C |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 0.192066 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 21 |
|---|
| Fosmid unclonability p-value | 0.162814 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGGCGTA GCAAGCTCAC CCCAACCACA CCCCCCATGT TCAAGAACCT CTCCGTCTAC
CGAATCCAGG GCGACTGGCA CCCGGCAATC GCCGAAGCCG AAGCGAGCCT GCAGAAGTTC
CGTTTCGCAG AATGCGGCGC CACCCAGGCC ATCTCGGCCG GCTGGGTCGA ACCTCGCGGC
GAGAAGCACG GCCCGCTCGT CGAGGCGGTC GGTGATCAGT GGATGCTCAC CCTGTGCATC
CAGACCAAGC TGCTGCCCGC CGGCGTCATC AAGCAGCACG TCGACGCACG CATCGAGCAG
ATCAAGCAGC GCGAGGCGCG CCGACCGGGC AAGAAGGAGG TCCGGGAGAT CAAGGAAGCG
GTCATCCTCG AACTGCTGCC CAAGGCCTTC TCGAAGAAGG AACACATCTC GGTCTGGATC
GACCGCAAGA ACAAGCTCGT GGCGATCGAC ACCGCGAGCC AGTCGAAGTG CGACACGGCC
ACGTCCGCGC TGGTCAAGAC GCTGGACGGC CTGGCCATCG GGCTGATCCA GACCCAGATG
TCGCCGGGCA CCTGCATGTC TCAGTGGCTC ATGGACGGCG AGGCGCCGGA CGGTTTCGGC
GTCGAGCGCG AGTGCGAGCT CAAGTCGAGC GACGAGAGCC GCAGCGCGGT GAAGTATTCG
CGCCACGTGC TGGACATCGA CGAGGTCAAG CAGCACCTGA CGCATGGCAA GACGCCCACC
CAGCTGGCCA TGACCTGGAC CGACAGGGTC TCTTTCACCC TCACCGACGC AATGGCCCTG
AAGAAGGTCA CCTTCCTCGA GACCCCGCTC ATGAAGAAGA AGGCCGGCGG AGACGATCCG
TTCGACGCGA ACGCGGCCAT CGTCACCGGC GAGCTGAGTC AGCTCATCCC GCAGCTGATC
GAAGCGCTGG GCGGCGAACT GGAGTTCACC GGCGAGTCGG GCGAAGGCGC CCGCGAGGCC
AAGAGCGAAG AGCGCGAGCA GGAGACGGCC GAGGCATGA
|
|---|
| Protein sequence | MRRSKLTPTT PPMFKNLSVY RIQGDWHPAI AEAEASLQKF RFAECGATQA ISAGWVEPRG
EKHGPLVEAV GDQWMLTLCI QTKLLPAGVI KQHVDARIEQ IKQREARRPG KKEVREIKEA
VILELLPKAF SKKEHISVWI DRKNKLVAID TASQSKCDTA TSALVKTLDG LAIGLIQTQM
SPGTCMSQWL MDGEAPDGFG VERECELKSS DESRSAVKYS RHVLDIDEVK QHLTHGKTPT
QLAMTWTDRV SFTLTDAMAL KKVTFLETPL MKKKAGGDDP FDANAAIVTG ELSQLIPQLI
EALGGELEFT GESGEGAREA KSEEREQETA EA
|
|---|
| |