| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mpe_B0083 |
|---|
| Symbol | |
|---|
| ID | 4787686 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylibium petroleiphilum PM1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008826 |
|---|
| Strand | + |
|---|
| Start bp | 74976 |
|---|
| End bp | 76298 |
|---|
| Gene Length | 1323 bp |
|---|
| Protein Length | 440 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 640092492 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001023097 |
|---|
| Protein GI | 124262627 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 0.690392 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 13 |
|---|
| Fosmid unclonability p-value | 0.00257174 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGAGTGACT TCCTTGTCTT GCCGCGGTTA CCTGTCATGT CACGTTCGAG TGCCATGCCC
CAGAGAGGGC AGGCCAGTCT TTTCGCCTCT GAGGACGAAG CTGATCCCTA CAAGAAAGCT
GTCGAGATCG TCCACGCGCT TCCGCGTCAG GGCCTGTCCT TGCTCAGCCG GAAGGTTGGG
AACTGCCTGC TCCGGCAAGT CGTCAACGTC GGCCCTCGCG ACGATGCTTG GTACGAGATC
GGCATCAGCC CGCTGGCCCA GATGGCCGGC TTCGACTCCA AGGACTTCGC GCACCTGAAG
TCCGCGCTGC GCGCCCTCAT GGGCTTGGTC TTCGAGTGGG ACGTTGTGAC TCCGGTGACC
AAGCGCCGCG GCTGGGAGGC TGCCAGTCTC TTCCCCAACG TGAAGATCCC TCCCGGCGCC
GGCGTCGTGC GCTTCCAGGT CAACCCCGAG CTGCTGCCGC TGATCGTCAA GCCCGAGGTC
TACGCGCTCA TCGATATGGC CGTCGTGCGT CGATTCCGGC GCACCGCATC TCTCGCGCTC
TGGGAACACT GCGTTCGCTT CGAGCGCGTC GGCGCGACGT CAGAGGTGCC TTGGCAGACG
CTGCGCGACA TCCTGCTGGG CCAGTCGGCC GACTCGAAGA CGTACAACGA GTTCAAGTAT
TTCAAGGCCA AGGTCCTGGC TCCCGCGATC CGCGAGATCA ACAGCGAGTC GAACCACCAG
GTCGAGATGC GCATGAACTA CGTCGGGCGT TTCGTCTCGA CGATCGCGTT CACCATCCGG
CCGAAGGCTG AGGCTACCGA CAGTCTGACA CCTGAGACCA TGCACATCGT CGGCGAGATG
GTGCAGATCG GCGTGCCGCA GGGCGACGCG CGCCGCCTGG CCAAGATGTA CGGCGAGGCC
AAGCTGAAGG GCGCGTTGCA GTACACGCGT GATCGCATGG CTGACACGAA GCGTGAGCCG
CTGAGCAATC CAGGCGCCTA CTTCCGGCAC GCCCTGCACA CGGGCTACGC GCGTCCGGCG
GAAATCGCCA TCGCGCCGGA GCAGACCACT TCGCCGAGCG AGGACCTGGC CACCCAGCTT
CGCTCCCACC GGGCAAGAGA GGCTCAGGCG TACTACCGAG AGCTCGACGC TGACGAACAG
CGCCAGCTGG TCGAGCGGTA CAACTGCCAG CAGGCACTGG GAGCGTTGCA GGTGAAGACC
AAGCCCACGC GCGCGGCCGA GGCGGCCTTC TCGCGATGGC TGGCGATCGA CACGTGGGGC
GAGCCGTCCA AGGAGGACCT GCTCGAGTTC GCCGCGCAGA TGCTGGCGGC GAAGACTCGC
TGA
|
|---|
| Protein sequence | MSDFLVLPRL PVMSRSSAMP QRGQASLFAS EDEADPYKKA VEIVHALPRQ GLSLLSRKVG
NCLLRQVVNV GPRDDAWYEI GISPLAQMAG FDSKDFAHLK SALRALMGLV FEWDVVTPVT
KRRGWEAASL FPNVKIPPGA GVVRFQVNPE LLPLIVKPEV YALIDMAVVR RFRRTASLAL
WEHCVRFERV GATSEVPWQT LRDILLGQSA DSKTYNEFKY FKAKVLAPAI REINSESNHQ
VEMRMNYVGR FVSTIAFTIR PKAEATDSLT PETMHIVGEM VQIGVPQGDA RRLAKMYGEA
KLKGALQYTR DRMADTKREP LSNPGAYFRH ALHTGYARPA EIAIAPEQTT SPSEDLATQL
RSHRAREAQA YYRELDADEQ RQLVERYNCQ QALGALQVKT KPTRAAEAAF SRWLAIDTWG
EPSKEDLLEF AAQMLAAKTR
|
|---|
| |