Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mpe_A3806 |
Symbol | |
ID | 4785917 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methylibium petroleiphilum PM1 |
Kingdom | Bacteria |
Replicon accession | NC_008825 |
Strand | - |
Start bp | 4024926 |
End bp | 4025708 |
Gene Length | 783 bp |
Protein Length | 260 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 640092389 |
Product | short chain dehydrogenase |
Protein accession | YP_001022994 |
Protein GI | 124268990 |
COG category | [R] General function prediction only |
COG ID | [COG0300] Short-chain dehydrogenases of various substrate specificities |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 0.187681 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | GTGAGTGCCG CCGCGCCGCT GGTCTTCATC ACCGGGGCGT CGAGCGGCAT CGGCCAGGCC CTGGCGGCCC GCTTCGCGCA GGCCGGCTAC CGTCTGGCGC TGGTAGCGCG CCGCGCCCAC GAGATCGAGG CCTGGTGCCG TGCCCGTGGC TGGCCAGCTG AACGTTGGGC GGTCTACGCG GCCGACGTGC GCGACGTGGC GAGCATCACC GCGGCCGGCC GCGCGTGCCT TCAGGACCAG GGCCTGCCCG ACGTGGTGGT GGCCAACGCC GGCATCAGCA TCGGCGTCGA TACCGCGGAG TACGAAGACC TGGAAGTGAT CCGCGCCACC TTCGAGACCA ACAACCTTGG CATGGCTGCC ACGTTCCAGC CCTTCGTGAA GCCGATGCGC GAGCGGCGCT CGGGCACGTT GGTGGGAGTG GCGAGCGTCG CGGCCATCCG CGGCCTGCCC GGCCACGGCG CCTACTGCGC GAGCAAGGCG GGCGTGGTGA GCTATTGCGA GAGCCTGCGC GGTGAGTGCC GCGTGTTCGG GATCCGGGTC GTGACGTTGG TGCCCGGCTA CGTGGCGACG CCGCTGACTG CCGGCAACCG CTACGGCATG CCCTTCCTGA TGACGCCCGA GGCCTTTGCC GAGCGCGCCG TGGCGGCGAT CCGGGCCGGC GTCAGCTACC GCGTGATCCC CTGGCAGATG GGGATCGTCG CCAAGCTGAT GCGGCTGCTC CCGAACGCCG TGCTGGACCG TGCGCTGGTC GGACGGGGCC GCAAGAAGCG CCAGGGCGAA TAG
|
Protein sequence | MSAAAPLVFI TGASSGIGQA LAARFAQAGY RLALVARRAH EIEAWCRARG WPAERWAVYA ADVRDVASIT AAGRACLQDQ GLPDVVVANA GISIGVDTAE YEDLEVIRAT FETNNLGMAA TFQPFVKPMR ERRSGTLVGV ASVAAIRGLP GHGAYCASKA GVVSYCESLR GECRVFGIRV VTLVPGYVAT PLTAGNRYGM PFLMTPEAFA ERAVAAIRAG VSYRVIPWQM GIVAKLMRLL PNAVLDRALV GRGRKKRQGE
|
| |