Gene Mpe_A3805 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMpe_A3805 
Symbol 
ID4785916 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylibium petroleiphilum PM1 
KingdomBacteria 
Replicon accessionNC_008825 
Strand
Start bp4024345 
End bp4024833 
Gene Length489 bp 
Protein Length162 aa 
Translation table11 
GC content71% 
IMG OID640092388 
ProductRNA-binding region RNP-1 
Protein accessionYP_001022993 
Protein GI124268989 
COG category[R] General function prediction only 
COG ID[COG0724] RNA-binding proteins (RRM domain) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.169382 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGCAACA AGCTGTACGT GGGCAACCTT GCCTACAGTG TGCGCGACGA CGATCTGCAA 
CAGGCGTTCG GCGAATTCGG CGCCGTCACC TCGGCCAAGG TCATGATGGA CCGGGACACC
GGCCGCTCGA AGGGCTTCGG CTTCGTCGAG ATGGGCTCCG ATGCCGAGGC CCAGGCGGCC
ATCGAAGGCA TGAACGGTCA GTCCCTGTCC GGTCGCGCGA TCGTCGTCAA TGAAGCCCGC
CCTCGTGAAG AGCGGCCGGG TGGTTTCCGT GGTCCCTATG GCGGCGGCGG TGCCGGCGGC
GGTGGTGGCT ACGGCGGCGG CGGTGGTGGC CGCAGCGGCG GCGGTGGTGG TTATGGCGGT
GGTGGTGGCG GCTACGGCGG CGGCGGCGGT GGTCGCAGCG GCGGTGGCGG CGGTTATGGC
GGCGGCGGTG GTCGCAGCGG TGGTGGTGGC GGTTACGGCG GCGGCGGCGG TGGCCGCGGC
GGCTACTGA
 
Protein sequence
MGNKLYVGNL AYSVRDDDLQ QAFGEFGAVT SAKVMMDRDT GRSKGFGFVE MGSDAEAQAA 
IEGMNGQSLS GRAIVVNEAR PREERPGGFR GPYGGGGAGG GGGYGGGGGG RSGGGGGYGG
GGGGYGGGGG GRSGGGGGYG GGGGRSGGGG GYGGGGGGRG GY