Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mpe_A3805 |
Symbol | |
ID | 4785916 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methylibium petroleiphilum PM1 |
Kingdom | Bacteria |
Replicon accession | NC_008825 |
Strand | + |
Start bp | 4024345 |
End bp | 4024833 |
Gene Length | 489 bp |
Protein Length | 162 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 640092388 |
Product | RNA-binding region RNP-1 |
Protein accession | YP_001022993 |
Protein GI | 124268989 |
COG category | [R] General function prediction only |
COG ID | [COG0724] RNA-binding proteins (RRM domain) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 0.169382 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGGCAACA AGCTGTACGT GGGCAACCTT GCCTACAGTG TGCGCGACGA CGATCTGCAA CAGGCGTTCG GCGAATTCGG CGCCGTCACC TCGGCCAAGG TCATGATGGA CCGGGACACC GGCCGCTCGA AGGGCTTCGG CTTCGTCGAG ATGGGCTCCG ATGCCGAGGC CCAGGCGGCC ATCGAAGGCA TGAACGGTCA GTCCCTGTCC GGTCGCGCGA TCGTCGTCAA TGAAGCCCGC CCTCGTGAAG AGCGGCCGGG TGGTTTCCGT GGTCCCTATG GCGGCGGCGG TGCCGGCGGC GGTGGTGGCT ACGGCGGCGG CGGTGGTGGC CGCAGCGGCG GCGGTGGTGG TTATGGCGGT GGTGGTGGCG GCTACGGCGG CGGCGGCGGT GGTCGCAGCG GCGGTGGCGG CGGTTATGGC GGCGGCGGTG GTCGCAGCGG TGGTGGTGGC GGTTACGGCG GCGGCGGCGG TGGCCGCGGC GGCTACTGA
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Protein sequence | MGNKLYVGNL AYSVRDDDLQ QAFGEFGAVT SAKVMMDRDT GRSKGFGFVE MGSDAEAQAA IEGMNGQSLS GRAIVVNEAR PREERPGGFR GPYGGGGAGG GGGYGGGGGG RSGGGGGYGG GGGGYGGGGG GRSGGGGGYG GGGGRSGGGG GYGGGGGGRG GY
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