Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mpe_A3694 |
Symbol | nikB |
ID | 4786043 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methylibium petroleiphilum PM1 |
Kingdom | Bacteria |
Replicon accession | NC_008825 |
Strand | - |
Start bp | 3906769 |
End bp | 3907707 |
Gene Length | 939 bp |
Protein Length | 312 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 640092277 |
Product | IM pore protein |
Protein accession | YP_001022882 |
Protein GI | 124268878 |
COG category | [E] Amino acid transport and metabolism [P] Inorganic ion transport and metabolism |
COG ID | [COG0601] ABC-type dipeptide/oligopeptide/nickel transport systems, permease components |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 0.916942 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCGGCCT ACCTGATCCG ACGCCTGTGG CAAATGATCC CGACATTGGT CGGGGTCGTG CTGCTGGTGT TCTTCCTGTT CAAGACCTTC GGGGGCGACC CGGCCGAGAT CCTCGGCGGC CTGAACGCCA GTGCCGAGCA GGTCGACGCG ATCCGCGAGC AGCTCGGCCT GAACAAGCCG GTGTGGCAGC AGCTGTGGAT CTTCGTGCAG CAGATCGTCA CCTTCGATTG GGGCAAGAGC TGGGCCACCA ACGAGGCGGT CAGCTCGCTG TTCGCGAGCC GCCTGCCGGC CACGCTGACG GTGATGACGC CGATCCTGCT GCTCGACGTG CTGCTGGCGA TTCCGTTCGC GCTGGCCGTC GCCTACGTGC GCGGCTCGCT GACCGACCGC GCGATCATGG TCATCACCAC CATCGCGCTG TCGATCAGCT TCCTGGTCTA CGTGATCGTC GGCCAGTACG TGTTCGCGTT CCGGCTCGGC TGGTTCCCGG TGCAGGGCTG GAGCGACAGC GTGTGGACCA ACCTCGCGGT CTACGCCCCG CTGCCGGTGC TGCTGGCGGT GATGGTCGGC ATCTCGCCGC AGACGCGGCT CTACCGCAGC TTCTTCCTCG ACGAGATCGG GCAGGACTAT GTGCGTACGG CACGCGCCAA GGGCCTCACC GAGACACGCA TCCTGCTCAA GCATGTGCTG CGCAACGCGT TGATCCCGAT CCTGACCAAC GTGGCAGTGG CGCTGCCGGG CATCTTCGTC GGCTCCTTCC TGATCGAGAC CTTCTTCTCC ATCCCGGGCC TCGGACGCGA GGTGCTGCTG GCGGTGAACC GCAGCGACTA TCCCGTCATC CAGGCCGTCA CGATCTACAT CGCGGTCATC ACGATGCTGG TCAACCTGGC GACCGACGTG CTCTACAAGC TGGCCGACCC GCGGGTGGTG CTGAAATGA
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Protein sequence | MAAYLIRRLW QMIPTLVGVV LLVFFLFKTF GGDPAEILGG LNASAEQVDA IREQLGLNKP VWQQLWIFVQ QIVTFDWGKS WATNEAVSSL FASRLPATLT VMTPILLLDV LLAIPFALAV AYVRGSLTDR AIMVITTIAL SISFLVYVIV GQYVFAFRLG WFPVQGWSDS VWTNLAVYAP LPVLLAVMVG ISPQTRLYRS FFLDEIGQDY VRTARAKGLT ETRILLKHVL RNALIPILTN VAVALPGIFV GSFLIETFFS IPGLGREVLL AVNRSDYPVI QAVTIYIAVI TMLVNLATDV LYKLADPRVV LK
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