| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mpe_A3673 |
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| Symbol | |
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| ID | 4786081 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methylibium petroleiphilum PM1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008825 |
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| Strand | + |
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| Start bp | 3883575 |
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| End bp | 3884930 |
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| Gene Length | 1356 bp |
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| Protein Length | 451 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 640092256 |
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| Product | putative urea/short-chain amide transport system substrate-binding protein |
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| Protein accession | YP_001022861 |
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| Protein GI | 124268857 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0683] ABC-type branched-chain amino acid transport systems, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.0513677 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGACAAACA AGCGACCTAT CGCGTTCGAC GCAACCCCCG ACACCCTGCG CCGGAGCCTC
GTGCTGTCCG CCGCGGCCGC GAGCGGGCTG GGCCTGCTGC CCGGCGCGAT GCGCGACGCG
CGAGCGCAGA GCTTCCCGCC GCTCGGCAAC TTTCCGGCCG GCACCGAGGG CAACTCGGTA
TTCGTGGGCG TGTCGGTCCC GCTGACCGGG GCGTTCTCGG CCGAAGGCAA GGATCAGCAG
CTCGGCTTCG AGCTGGCGTT CGAGCACCTG AACTCGGGCA AGCTGGCCGG CAAGATCCCC
GAGCTCAAGG GCAAGGGTGT CCTGGGCAAG ACCATCACCT TCGGCGTGGT CGATACGGAG
GCCAAGGCCG AATCGGCGAT CCAGGGACAG ACCCGCTTCC TCCGCAACAA CAAGGCGATC
CTGATGACCG GCTGCTACAG CAGCGCGGTG ACCGTCGCGC TCGGCAAGCT GGCGCAGCGC
GAGAAGGTGC TCTACATGGC CGGTCCGGCC GGCTCGGACG ACGTGACCGG CAAGGACTGC
CAGCGCTACA GCTTCCGCTC GCAGCCCAGC ACCACCATGG CCTCGCGCGC GCTGGCCCCG
GTGCTGGCCG AGCGGCTGGG CAAGGGCAAG AAGGTGGCCT ACCTGGTGCC CGACTACACC
TTCGGCCACA CGCAGTTCGA ATCGATGGCG CGGCTGACCG AGCCGATGGG CTGGAAGACG
GTGTCCAAGC AGGTCTGCCC GATCGGCACC GCCGACTTCA GCACCTACCT GCTCAACATC
GCCAACAGCG GCGCCGACGT GTTCGTGAAC TGCACGGTCG GCAACGATTG CTCGGTGTCC
ATCAAGCAGG CCAAGAACTT CGGTGTCATG AAGAATGCCG CCCTGGTGGT GCCGACGCTG
CAGCCCTTCC TTGCGCAGCA GCTGGGCCCC GAGGTGACGC AGGACATCCT GGGCGTGATG
GACTTCTGGT GGTCGCTGGC CGAGAGCAAC GAGCTCGCGA AGCAGTTCGT CGACGACTTC
CAGGCCAAGC ACAACTACAA GCCCTACTGG CCGGCGCACA TCGCCTACTC GCAGATGCTG
ATCTGGGCGG TGGCGGTGGA GCGCGCCAAG ACCTTCTACC CGCCGGAGGT CATCAAGGCC
CTCGAGGCGC GCGTGCCGAT CAGGACCACG CTGGGCGACG TGATGTACCG TCCCGAGGAC
CACCAGCTGG TCCGTCCTGT CCCGGTGATG CGCGGCAAGA AGCCCTCCGA GATGAAGTCC
AAGGACGACT ACTACGAGGT GATCAAGATG ATCCCCGGCG CCGACGCCGT GACGCCGCTC
GACCAGGGCA CCTGCAAGAT GGGCGAACTC ACCTGA
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| Protein sequence | MTNKRPIAFD ATPDTLRRSL VLSAAAASGL GLLPGAMRDA RAQSFPPLGN FPAGTEGNSV
FVGVSVPLTG AFSAEGKDQQ LGFELAFEHL NSGKLAGKIP ELKGKGVLGK TITFGVVDTE
AKAESAIQGQ TRFLRNNKAI LMTGCYSSAV TVALGKLAQR EKVLYMAGPA GSDDVTGKDC
QRYSFRSQPS TTMASRALAP VLAERLGKGK KVAYLVPDYT FGHTQFESMA RLTEPMGWKT
VSKQVCPIGT ADFSTYLLNI ANSGADVFVN CTVGNDCSVS IKQAKNFGVM KNAALVVPTL
QPFLAQQLGP EVTQDILGVM DFWWSLAESN ELAKQFVDDF QAKHNYKPYW PAHIAYSQML
IWAVAVERAK TFYPPEVIKA LEARVPIRTT LGDVMYRPED HQLVRPVPVM RGKKPSEMKS
KDDYYEVIKM IPGADAVTPL DQGTCKMGEL T
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